miRNEST 2.0, an integrative microRNA resource :: BLAST
>48423_cpa-miR162a:pmrd
Length = 109
Score = 79.8 bits (40), Expect = 3e-16
Identities = 77/87 (88%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcct--gaatttggctgtggaagaacacaaagcaa 58
||||||||||||||||||||||||||||| |||||||| |||| || | |||| | ||
Sbjct: 14 tggaggcagcggttcatcgatctcttcctgggaatttgg-tgtgaaaaatcacagaacat 72
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 73 gaatcgatcgataaacctctgcatcca 99
>48493_ghr-miR162a:pmrd
Length = 148
Score = 75.8 bits (38), Expect = 4e-15
Identities = 79/89 (88%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctga--atttggctgtg-gaagaacacaaag-c 56
||||||||||||||||||||||||||||||| |||| | |||| ||| |||||||| |
Sbjct: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 84
Query: 57 aagaatcggtcgataaacctctgcatcca 85
| |||||| ||||||||||||||||||||
Sbjct: 85 atgaatcgatcgataaacctctgcatcca 113
>54784_vvi-miR162:pmrd
Length = 103
Score = 73.8 bits (37), Expect = 2e-14
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaacacaaagcaaga 60
|||| ||||||||||||||||||||||||||| ||| |||| || || || | |||||
Sbjct: 10 tggatgcagcggttcatcgatctcttcctgaaattgt-tgtgaaaaaag-cagatcaaga 67
Query: 61 atcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||
Sbjct: 68 atcggtcgataaacctctgcatcca 92
>48682_llu-miR162:pmrd
Length = 80
Score = 61.9 bits (31), Expect = 7e-11
Identities = 71/85 (83%), Gaps = 7/85 (8%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaacacaaagcaaga 60
|||| ||||||||| |||||||||||||||||||| || |||||||| || ||
Sbjct: 2 tggaagcagcggtttatcgatctcttcctgaattt-------gattaacacaaaccatga 54
Query: 61 atcggtcgataaacctctgcatcca 85
|||| ||||||||||||||||||||
Sbjct: 55 atcgatcgataaacctctgcatcca 79
>54387_rco-miR162:pmrd
Length = 96
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 4 tggaggcagcggttcatcgatctcttcctg 33
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 68 gaatcgatcgataaacctctgcatcca 94
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 94 tggaggcagcggttcatcgatctcttcctg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatcca 9
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 94 tggaggcagcggttcatcgatctcttcctg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatcca 9
>51616_ptc-miR162a:pmrd
Length = 107
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatctcttcctg 41
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatcca 97
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 52 aaagcaagaatcggtcgataaacctctgcatcca 85
||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaagcaagaatcgatcgataaacctctgcatcca 16
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 101 tggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 52 aaagcaagaatcggtcgataaacctctgcatcca 85
||||||||||||| ||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatcca 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 13 tggaggcagcggttcatcgatc 34
>46937_ath-miR162a:pmrd
Length = 140
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 26 tggaggcagcggttcatcgatctcttcctg 55
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 52 aaagcaagaatcggtcgataaacctctgcatcca 85
|||||| |||| | ||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatcca 108
>48545_gma-miR162a:pmrd
Length = 102
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaat 33
|||| ||||||||||||||||||||||||||||
Sbjct: 11 tggatgcagcggttcatcgatctcttcctgaat 43
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatcca 92
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatctcttcctgaa 32
||||||||||||||||||||||| ||||||||
Sbjct: 93 tggaggcagcggttcatcgatcttttcctgaa 62
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatcca 8
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatctcttcctgaa 32
||||||||||||||||||||||| ||||||||
Sbjct: 95 tggaggcagcggttcatcgatcttttcctgaa 64
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatcca 10
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatctcttcctgaa 32
||||||||||||||||||||||| ||||||||
Sbjct: 95 tggaggcagcggttcatcgatcttttcctgaa 64
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatcca 10
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatctcttcctgaa 32
||||||||||||||||||||||| ||||||||
Sbjct: 93 tggaggcagcggttcatcgatcttttcctgaa 62
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatcca 8
>51618_ptc-miR162c:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaa 32
||||||||||||||||||||||| ||||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctgaa 43
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatcca 97
>51617_ptc-miR162b:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaa 32
||||||||||||||||||||||| ||||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctgaa 43
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatcca 97
>54948_zma-miR162b:pmrd
Length = 130
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatcca 129
>54542_sly-miR162:pmrd
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatcca 98
>48707_mtr-miR162d:pmrd
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaattt 35
|||| |||||||||||||||||| |||||||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcctgaattt 36
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
>48706_mtr-miR162c:pmrd
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||||
Sbjct: 27 gaatcggtcgataaacctctgcatcca 1
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatctcttcctgaattt 35
|||| |||||||||||||||||| |||||||||||
Sbjct: 85 tggatgcagcggttcatcgatctgttcctgaattt 51
>48705_mtr-miR162b:pmrd
Length = 85
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgaattt 35
|||| |||||||||||||||||| |||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctgaattt 35
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||||||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>48834_osa-miR162a:pmrd
Length = 171
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||| ||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatcca 162
>48690_mdo-miR162:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 gaatcggtcgataaacctctgcatcca 85
|||||||||||||||||| ||||||||
Sbjct: 61 gaatcggtcgataaacctttgcatcca 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatct 23
|||||||| ||||||||||||||
Sbjct: 2 tggaggcatcggttcatcgatct 24
>48836_osa-miR162m:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 50 acaaagcaagaatcggtcgataaacctctgcatcca 85
|||| ||| |||||| ||||||| ||||||||||||
Sbjct: 78 acaacgcaggaatcgatcgataagcctctgcatcca 113
>48835_osa-miR162b:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 50 acaaagcaagaatcggtcgataaacctctgcatcca 85
|||| ||| |||||| ||||||| ||||||||||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatcca 123
>48685_lsa-miR162:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatcca 20
>48546_gma-miR162m:pmrd
Length = 367
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 tcgataaacctctgcatcca 85
||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatcca 20
