miRNEST 2.0, an integrative microRNA resource :: BLAST
>48497_ghr-miR171:pmrd
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 61 tctcagattgagccgcgccaatatc 85
|||||||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>52331_ptc-miRf10509-akr:pmrd
Length = 99
Score = 91.7 bits (46), Expect = 8e-20
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
||||||||||||||||||||||||||||||||||| | | | | |||||||||||
Sbjct: 8 gatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacga 67
Query: 61 tctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||
Sbjct: 68 tctcagattgagccgcgccaatatca 93
>51686_ptc-miR171c:pmrd
Length = 104
Score = 91.7 bits (46), Expect = 8e-20
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
||||||||||||||||||||||||||||||||||| | | | | |||||||||||
Sbjct: 11 gatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacga 70
Query: 61 tctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||
Sbjct: 71 tctcagattgagccgcgccaatatca 96
>54832_vvi-miR171e:pmrd
Length = 103
Score = 85.7 bits (43), Expect = 5e-18
Identities = 75/86 (87%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
|||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct: 12 gatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaacga 65
Query: 61 tctcagattgagccgcgccaatatca 86
|||| |||||||||||||||||||||
Sbjct: 66 tctctgattgagccgcgccaatatca 91
>54554_sly-miR171d:pmrd
Length = 112
Score = 71.9 bits (36), Expect = 7e-14
Identities = 75/86 (87%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
|||||||||||||||||||||||||||| ||||| | | ||| ||||||| ||||
Sbjct: 12 gatgttggtgaggttcaatccgaagacgaatttatgctt--attt--tcgtaaagaacga 67
Query: 61 tctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||
Sbjct: 68 tctcagattgagccgcgccaatatca 93
>52488_ptc-miRf10666-akr:pmrd
Length = 93
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 gtaaaatacgatctcagattgagccgcgccaatatca 86
||||||| |||||||||||||||||||||||||||||
Sbjct: 52 gtaaaatccgatctcagattgagccgcgccaatatca 88
>51687_ptc-miR171d:pmrd
Length = 100
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 50 gtaaaatacgatctcagattgagccgcgccaatatca 86
||||||| |||||||||||||||||||||||||||||
Sbjct: 56 gtaaaatccgatctcagattgagccgcgccaatatca 92
>54833_vvi-miR171f:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 59 gatctcagattgagccgcgccaatatca 86
||||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatca 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgttggtgaggttcaatccgaaga 26
|||||||||||||||||||| |||||
Sbjct: 12 gatgttggtgaggttcaatctgaaga 37
>51383_ppt-miR171b:pmrd
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 62 ctcagattgagccgcgccaatatca 86
|||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatca 85
>51382_ppt-miR171a:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 tcagattgagccgcgccaatatca 86
||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatca 84
>54582_smo-miR171d:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 tctcagattgagccgcgccaatatca 86
||||| ||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatca 90
>54667_stu-miR171:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatca 86
|||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatca 22
>54666_stu-miR170:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatca 86
|||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatca 22
>54553_sly-miR171c:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatca 86
|||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatca 99
>54461_sbi-miR171j:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatca 86
|||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatca 104
>55028_zma-miR171a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>55027_zma-miR170p:pmrd
Length = 62
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 43 gattgagccgcgccaatatc 62
>54910_zel-miR171:pmrd
Length = 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>54458_sbi-miR171g:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 3 ttggtgaggttcaatccga 21
>54451_sbi-miR170:pmrd
Length = 55
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 36 gattgagccgcgccaatatc 55
>51694_ptc-miR171k:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>51342_ppd-miR170:pmrd
Length = 297
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 278 gattgagccgcgccaatatc 297
>48895_osa-miR171a:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 5 ttggtgaggttcaatccga 23
|||||||||||||||||||
Sbjct: 14 ttggtgaggttcaatccga 32
>48636_gra-miR171:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>48569_gma-miR171m:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 153 gattgagccgcgccaatatc 172
>48484_gcl-miR171:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 186 gattgagccgcgccaatatc 205
>48407_bra-miR171e:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>48369_bna-miR171g:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatc 98
>48368_bna-miR171f:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>48313_bdi-miR171d:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 82 gattgagccgcgccaatatc 101
>48311_bdi-miR171a:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>46982_ath-miR171o:pmrd
Length = 339
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 320 gattgagccgcgccaatatc 339
>46981_ath-miR171n:pmrd
Length = 461
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46980_ath-miR171m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>46977_ath-miR171a:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>46976_ath-miR170n:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 153 gattgagccgcgccaatatc 172
>46975_ath-miR170m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>46853_ace-miR171c:pmrd
Length = 216
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 197 gattgagccgcgccaatatc 216
>46852_ace-miR171b:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 196 gattgagccgcgccaatatc 215
>46851_ace-miR171a:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46850_ace-miR170d:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 196 gattgagccgcgccaatatc 215
>46849_ace-miR170c:pmrd
Length = 55
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46848_ace-miR170b:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 57 gattgagccgcgccaatatc 76
>46847_ace-miR170a:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 gattgagccgcgccaatatc 85
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>54639_sof-miR171a:pmrd
Length = 375
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 67 attgagccgcgccaatatc 85
|||||||||||||||||||
Sbjct: 357 attgagccgcgccaatatc 375
