miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 119 bits (60), Expect = 7e-28
Identities = 144/169 (85%), Gaps = 6/169 (3%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||| | || || ||||||||| |||||||||||||||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacagccctataagca-gagattataattttggataggcttgtggcttgcatatctca 119
||||||||||||| | || || | ||||| ||| ||| || |||||||||||||||
Sbjct: 73 cccacagccctatcaccatcag----tcatttt-gatgggcctgcggcttgcatatctca 127
Query: 120 ggagcttcattaccttgtattagatccttgtttggattgaagggagctc 168
||||||| ||||||| | ||||||| || |||||||||||||||||||
Sbjct: 128 ggagctttattacctaatgttagatctttttttggattgaagggagctc 176
>54777_vvi-miR159c:pmrd
Length = 190
Score = 113 bits (57), Expect = 4e-26
Identities = 143/169 (84%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacagccctataagcagagattataattttggataggcttgtggcttgcatatctcag 120
||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 71 cccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctcag 130
Query: 121 gagcttcatta-ccttgtattagatccttgtttggattgaagggagctc 168
||||| ||||| || || ||||||||||||||||||||||||||||||
Sbjct: 131 gagctgcattatccaagt-ttagatccttgtttggattgaagggagctc 178
>54378_pvu-miR159:pmrd
Length = 174
Score = 93.7 bits (47), Expect = 4e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
>54377_pvu-miR159:pmrd
Length = 174
Score = 93.7 bits (47), Expect = 4e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 91.7 bits (46), Expect = 2e-19
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||
Sbjct: 8 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 67
Query: 61 cc 62
||
Sbjct: 68 cc 69
>51604_ptc-miR159c:pmrd
Length = 183
Score = 91.7 bits (46), Expect = 2e-19
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>51602_ptc-miR159a:pmrd
Length = 183
Score = 91.7 bits (46), Expect = 2e-19
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
|||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>48539_gma-miR159a:pmrd
Length = 214
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 60
||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacag 67
|||||||
Sbjct: 83 cccacag 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 145 ccttgtttggattgaagggagctc 168
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>54540_sly-miR159:pmrd
Length = 177
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 39 attgagctgctgagctatggatcccacagccctat 73
||||||||||||| |||||||| || |||||||||
Sbjct: 41 attgagctgctgacctatggattcctcagccctat 75
Score = 40.1 bits (20), Expect = 5e-04
Identities = 53/63 (84%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 108 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 165
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 172
Query: 166 ctc 168
|||
Sbjct: 173 ctc 175
>54931_zma-miR159b:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctc 200
>54673_tae-miR159a:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>48657_hvv-miR159b:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcat 113
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
>46933_ath-miR159c:pmrd
Length = 225
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 gtttggattgaagggagctc 168
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
