miRNEST 2.0, an integrative microRNA resource :: BLAST
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatcaattcctgtgaa 35
|||||||||||||||||||||||||||||||||||
Sbjct: 102 ctggaggcagcggttcatcgatcaattcctgtgaa 68
>46938_ath-miR162b:pmrd
Length = 111
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatcaattcctgtgaa 35
|||||||||||||||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatcaattcctgtgaa 46
>54387_rco-miR162:pmrd
Length = 96
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 66 gcatgaatcgatcgataaacctctgcatccag 97
||||||||||||||||||||||||||||||||
Sbjct: 64 gcatgaatcgatcgataaacctctgcatccag 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 3 ctggaggcagcggttcatcgatc 25
>48682_llu-miR162:pmrd
Length = 80
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||||||||||||||||||||||||||||
Sbjct: 50 catgaatcgatcgataaacctctgcatccag 80
>48545_gma-miR162a:pmrd
Length = 102
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccag 93
>48493_ghr-miR162a:pmrd
Length = 148
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||||||||||||||||||||||||||||
Sbjct: 84 catgaatcgatcgataaacctctgcatccag 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatc 46
>48423_cpa-miR162a:pmrd
Length = 109
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||||||||||||||||||||||||||||
Sbjct: 70 catgaatcgatcgataaacctctgcatccag 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 13 ctggaggcagcggttcatcgatc 35
>46937_ath-miR162a:pmrd
Length = 140
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 64 aagcatgaatcgatcgataaacctctgcatccag 97
|||||||||| |||||||||||||||||||||||
Sbjct: 76 aagcatgaatagatcgataaacctctgcatccag 109
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatcaattcctgtgaa 35
||||||||||||||||||||||| ||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctgtgaa 59
>48834_osa-miR162a:pmrd
Length = 171
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||| ||||||||||||||||||||||||
Sbjct: 38 catgaaccgatcgataaacctctgcatccag 8
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatc 73
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||| ||||||||||||||||||||||||
Sbjct: 38 catgaaccgatcgataaacctctgcatccag 8
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatc 73
>51616_ptc-miR162a:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||| ||||||||||||||||||||||||
Sbjct: 68 catgaaccgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>48707_mtr-miR162d:pmrd
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
||||||||| |||||||||||||||||||||
Sbjct: 57 catgaatcggtcgataaacctctgcatccag 87
>48706_mtr-miR162c:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 67 catgaatcgatcgataaacctctgcatcca 96
||||||||| ||||||||||||||||||||
Sbjct: 30 catgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatcca 96
||||||||| ||||||||||||||||||||
Sbjct: 56 catgaatcggtcgataaacctctgcatcca 85
>54948_zma-miR162b:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>54784_vvi-miR162:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccag 93
>54542_sly-miR162:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 74 cgatcgataaacctctgcatccag 97
||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccag 7
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 94 ctggaggcagcggttcatcgatc 72
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 74 cgatcgataaacctctgcatccag 97
||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccag 9
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 96 ctggaggcagcggttcatcgatc 74
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 74 cgatcgataaacctctgcatccag 97
||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccag 9
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 96 ctggaggcagcggttcatcgatc 74
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 74 cgatcgataaacctctgcatccag 97
||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccag 7
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 94 ctggaggcagcggttcatcgatc 72
>51618_ptc-miR162c:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 cgatcgataaacctctgcatccag 97
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>51617_ptc-miR162b:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 cgatcgataaacctctgcatccag 97
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>48836_osa-miR162m:pmrd
Length = 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||||||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>48690_mdo-miR162:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
||||||||| ||||||||||| |||||||||
Sbjct: 58 catgaatcggtcgataaacctttgcatccag 88
>48685_lsa-miR162:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tcgataaacctctgcatccag 97
|||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccag 21
>48546_gma-miR162m:pmrd
Length = 367
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tcgataaacctctgcatccag 97
|||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccag 21
