miRNEST 2.0, an integrative microRNA resource :: BLAST
>54780_vvi-miR160c:pmrd
Length = 106
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacacgtagagacc 32
||||||||||||||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccacacgtagagacc 43
>51608_ptc-miR160a:pmrd
Length = 102
Score = 56.0 bits (28), Expect = 4e-09
Identities = 69/82 (84%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacacgtagagacccatc---tgtttatgatcggctactgcg 57
|||||||||||||||||||||| | | ||||| ||| ||||| ||| |||| |||
Sbjct: 12 gcctggctccctgtatgccacaagcaaagaccaatcttttgttttagattggctgttgcc 71
Query: 58 ggtggcgtgcgaggagccaagc 79
||||||||||||||||||||||
Sbjct: 72 ggtggcgtgcgaggagccaagc 93
>54407_sbi-miR160d:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 ctactgcgggtggcgtgcgaggagccaagc 79
||||||||| ||||||||||||||||||||
Sbjct: 70 ctactgcggatggcgtgcgaggagccaagc 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>48833_osa-miR160n:pmrd
Length = 131
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 ctactgcgggtggcgtgcgaggagccaagc 79
||||||||| ||||||||||||||||||||
Sbjct: 100 ctactgcggatggcgtgcgaggagccaagc 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>48829_osa-miR160d:pmrd
Length = 142
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 ctactgcgggtggcgtgcgaggagccaagc 79
||||||||| ||||||||||||||||||||
Sbjct: 107 ctactgcggatggcgtgcgaggagccaagc 136
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 9 gcctggctccctgtatgccac 29
>48791_oba-miR160:pmrd
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 50 ctactgcgggtggcgtgcgaggagccaagc 79
|||| |||||||||||||||||||||||||
Sbjct: 57 ctacggcgggtggcgtgcgaggagccaagc 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgccac 25
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 48 ggctactgcgggtggcgtgcgaggagccaagc 79
|||| |||| ||||||||||||||||||||||
Sbjct: 64 ggctgctgccggtggcgtgcgaggagccaagc 95
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccaca 22
||||||||||||||||||||||
Sbjct: 13 gcctggctccctgtatgccaca 34
>51611_ptc-miR160d:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 48 ggctactgcgggtggcgtgcgaggagccaagc 79
|||| |||| ||||||||||||||||||||||
Sbjct: 63 ggctgctgccggtggcgtgcgaggagccaagc 94
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccaca 22
||||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccaca 33
>54947_zma-miR160m:pmrd
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacac 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccacac 24
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 57 gggtggcgtgcgaggagccaagc 79
||||||||||| |||||||||||
Sbjct: 58 gggtggcgtgcaaggagccaagc 80
>54945_zma-miR160h:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacac 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccacac 24
>54944_zma-miR160g:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacac 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccacac 24
>54939_zma-miR160b:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacac 23
|||||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgccacac 44
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 57 gggtggcgtgcgaggagccaagc 79
||||||||||| |||||||||||
Sbjct: 78 gggtggcgtgcaaggagccaagc 100
>54938_zma-miR160a:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacac 23
|||||||||||||||||||||||
Sbjct: 11 gcctggctccctgtatgccacac 33
>54405_sbi-miR160b:pmrd
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacac 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccacac 24
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 57 gggtggcgtgcgaggagccaagc 79
||||||||||| |||||||||||
Sbjct: 59 gggtggcgtgcaaggagccaagc 81
>54404_sbi-miR160a:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacac 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccacac 24
>48826_osa-miR160a:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccacac 23
|||||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgccacac 27
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 57 gggtggcgtgcgaggagccaagc 79
||||||||||| |||||||||||
Sbjct: 62 gggtggcgtgcaaggagccaagc 84
>54675_tae-miR160:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 ctactgcgggtggcgtgcgaggagccaagc 79
|||| |||| ||||||||||||||||||||
Sbjct: 81 ctaccgcggatggcgtgcgaggagccaagc 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 23 gcctggctccctgtatgccac 43
>51334_pga-miR160:pmrd
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccaca 22
||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccaca 23
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccaca 22
||||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgccaca 27
>46935_ath-miR160b:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccaca 22
||||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgccaca 27
>54946_zma-miR160i:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 3 gcctggctccctgtatgccac 23
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 53 ctgcgggtggcgtgcgaggagccaagc 79
|||||| |||||||||||| |||||||
Sbjct: 53 ctgcggctggcgtgcgaggtgccaagc 79
>54942_zma-miR160e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgccac 30
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 53 ctgcgggtggcgtgcgaggagccaagc 79
|||||| |||||||||||| |||||||
Sbjct: 59 ctgcggctggcgtgcgaggtgccaagc 85
>54941_zma-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgccac 42
>54940_zma-miR160c:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgccac 28
>54759_ttu-miR160a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54575_smo-miR160b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 14 gcctggctccctgtatgccac 34
>54408_sbi-miR160e:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 53 ctgcgggtggcgtgcgaggagccaagc 79
|||||| |||||||||||| |||||||
Sbjct: 68 ctgcggctggcgtgcgaggtgccaagc 94
>54406_sbi-miR160c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>51367_ppt-miR160i:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>51364_ppt-miR160f:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>51363_ppt-miR160e:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>51359_ppt-miR160a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccac 32
>48832_osa-miR160m:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 57 gggtggcgtgcgaggagccaagc 79
||||||||||| |||||||||||
Sbjct: 59 gggtggcgtgcaaggagccaagc 81
>48828_osa-miR160c:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgccac 28
>48827_osa-miR160b:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 57 gggtggcgtgcgaggagccaagc 79
||||||||||| |||||||||||
Sbjct: 88 gggtggcgtgcaaggagccaagc 110
>46936_ath-miR160c:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgccac 26
>54783_vvi-miR160f:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54781_vvi-miR160d:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54574_smo-miR160a:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54541_sly-miR160a:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 21 gcctggctccctgtatgcca 40
>51610_ptc-miR160c:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51609_ptc-miR160b:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>48704_mtr-miR160e:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>48703_mtr-miR160d:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>48702_mtr-miR160b:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>48658_hvv-miR160a:pmrd
Length = 344
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 325 gcctggctccctgtatgcca 344
>48542_gma-miR160a:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>48397_bra-miR160a:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgcca 46
>48396_bra-miR160a:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgcca 46
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>46934_ath-miR160a:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>46865_aqc-miR160b:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
