miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51568_pta-miR482b:pmrd
Length = 92
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 tggaaggatagggtaagactagggttaagcagaaactctgcttcattaattctctgctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tggaaggatagggtaagactagggttaagcagaaactctgcttcattaattctctgctcc 66
Query: 61 agtcttccctactcctcccatt 82
||||||||||||||||||||||
Sbjct: 67 agtcttccctactcctcccatt 88
>51567_pta-miR482a:pmrd
Length = 92
Score = 147 bits (74), Expect = 1e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 1 tggaaggatagggtaagactagggttaagcagaaactctgcttcattaattctctgctcc 60
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 7 tggaaggatagggtaagactaaggttaaggagaaactctgcttcattaattctctgctcc 66
Query: 61 agtcttccctactcctcccatt 82
||||||||||||||||||||||
Sbjct: 67 agtcttccctactcctcccatt 88
>51570_pta-miR482d:pmrd
Length = 92
Score = 139 bits (70), Expect = 3e-34
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 1 tggaaggatagggtaagactagggttaagcagaaactctgcttcattaattctctgctcc 60
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 7 tggaaggatagggtaagactaaggttaaggagaaactctgcttcattaattctctgctcc 66
Query: 61 agtcttccctactcctcccatt 82
|||| |||||||||||||||||
Sbjct: 67 agtcctccctactcctcccatt 88
>51569_pta-miR482c:pmrd
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 cagtcttccctactcctcccatt 82
|||||||||||| ||||||||||
Sbjct: 55 cagtcttccctattcctcccatt 77
