miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 99.6 bits (50), Expect = 8e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||||| |||| | ||||||||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 ataccacagccctatccc 78
|| |||||||||||||||
Sbjct: 69 atcccacagccctatccc 86
Score = 89.7 bits (45), Expect = 7e-19
Identities = 74/83 (89%), Gaps = 3/83 (3%)
Strand = Plus / Plus
Query: 112 ttggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatcct 171
|||||||||||||||||||||||||||| |||||| ||||| | | | |||||||||
Sbjct: 101 ttggataggcttgtggcttgcatatctcaggagctgcattatccaagt---ttagatcct 157
Query: 172 tgtttggattgaagggagctcta 194
|||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctcta 180
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 87.7 bits (44), Expect = 3e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||||
Sbjct: 6 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 65
Query: 61 ataccacagccctatc 76
|| |||||| ||||||
Sbjct: 66 at-ccacagtcctatc 80
Score = 69.9 bits (35), Expect = 7e-13
Identities = 70/81 (86%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 114 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 173
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 92 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 148
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 ataccacagccctatc 76
|| |||||| ||||||
Sbjct: 71 at-ccacagtcctatc 85
Score = 69.9 bits (35), Expect = 7e-13
Identities = 70/81 (86%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 114 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 173
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51603_ptc-miR159b:pmrd
Length = 187
Score = 87.7 bits (44), Expect = 3e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||| | || ||| |||||||| ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 ataccacagccctatc 76
|| |||||||||||||
Sbjct: 71 atcccacagccctatc 86
Score = 69.9 bits (35), Expect = 7e-13
Identities = 61/69 (88%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 126 ggcttgcatatctctggagcttcattaccttattatgttagatccttgtttggattgaag 185
|||||||||||||| ||||||| ||||||| || |||||||| || ||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaat---gttagatctttttttggattgaag 169
Query: 186 ggagctcta 194
|||||||||
Sbjct: 170 ggagctcta 178
>51602_ptc-miR159a:pmrd
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 ataccacagccctatc 76
|| |||||| ||||||
Sbjct: 71 at-ccacagtcctatc 85
Score = 69.9 bits (35), Expect = 7e-13
Identities = 70/81 (86%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 114 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 173
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>54378_pvu-miR159:pmrd
Length = 174
Score = 81.8 bits (41), Expect = 2e-16
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| ||||||||| ||||||||| | |||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 ataccacag 69
|| ||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 167 atccttgtttggattgaagggagctcta 194
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>54377_pvu-miR159:pmrd
Length = 174
Score = 81.8 bits (41), Expect = 2e-16
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| ||||||||| ||||||||| | |||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 ataccacag 69
|| ||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 167 atccttgtttggattgaagggagctcta 194
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>48539_gma-miR159a:pmrd
Length = 214
Score = 73.8 bits (37), Expect = 4e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| ||||||||| ||||||||| | |||| ||||||||||| ||||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 ataccacag 69
|| ||||||
Sbjct: 81 atcccacag 89
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ccttgtttggattgaagggagctcta 194
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>54540_sly-miR159:pmrd
Length = 177
Score = 56.0 bits (28), Expect = 1e-08
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||| | | |||| |||| || ||||||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 61 ataccacagccctatc 76
|| || ||||||||||
Sbjct: 61 attcctcagccctatc 76
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 161 tgttagatccttgtttggattgaagggagctcta 194
|||| |||| || |||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctcta 177
>54931_zma-miR159b:pmrd
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgtttggattgaagggagctct 193
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>54673_tae-miR159a:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgtttggattgaagggagctct 193
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48657_hvv-miR159b:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgtttggattgaagggagctct 193
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>48686_ltu-miR159:pmrd
Length = 345
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48395_bra-miR159a:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
