miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54836_vvi-miR171i:pmrd
          Length = 103

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 2  gatgttggaatggctcaatcaaatcagatctccc 35
          |||||||||||||||||||||||||| |||||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctccc 46



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 tgattgagccgtgccaatatca 84
          ||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90




>54831_vvi-miR171d:pmrd
          Length = 100

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gtttgattgagccgtgccaatatca 84
          |||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88




>54551_sly-miR171a:pmrd
          Length = 122

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 55  ttttagtttgattgagccgtgccaatatc 83
           |||| ||||||||||||||||||||||||
Sbjct: 79  ttttcgtttgattgagccgtgccaatatc 107




>54452_sbi-miR171a:pmrd
          Length = 161

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 60  gtttgattgagccgtgccaatatca 84
           |||||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatatca 143




>51882_ptc-miRf10060-akr:pmrd
          Length = 87

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gtttgattgagccgtgccaatatca 84
          |||||||||||||||||||||||||
Sbjct: 60 gtttgattgagccgtgccaatatca 84




>51685_ptc-miR171b:pmrd
          Length = 103

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gtttgattgagccgtgccaatatca 84
          |||||||||||||||||||||||||
Sbjct: 68 gtttgattgagccgtgccaatatca 92




>51684_ptc-miR171a:pmrd
          Length = 104

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gtttgattgagccgtgccaatatca 84
          |||||||||||||||||||||||||
Sbjct: 69 gtttgattgagccgtgccaatatca 93




>51346_ppe-miR171:pmrd
          Length = 97

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 56 tttagtttgattgagccgtgccaatatca 84
          |||| ||||||||||||||||||||||||
Sbjct: 60 tttaatttgattgagccgtgccaatatca 88



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 1  tgatgttggaatggctcaatcaaatca 27
          |||||||||  ||||||||||||||||
Sbjct: 8  tgatgttggcgtggctcaatcaaatca 34




>51345_ppe-miR170:pmrd
          Length = 97

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 56 tttagtttgattgagccgtgccaatatca 84
          |||| ||||||||||||||||||||||||
Sbjct: 60 tttaatttgattgagccgtgccaatatca 88



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 1  tgatgttggaatggctcaatcaaatca 27
          |||||||||  ||||||||||||||||
Sbjct: 8  tgatgttggcgtggctcaatcaaatca 34




>48403_bra-miR171a:pmrd
          Length = 85

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gtttgattgagccgtgccaatatca 84
          |||||||||||||||||||||||||
Sbjct: 59 gtttgattgagccgtgccaatatca 83




>48386_bol-miR171a:pmrd
          Length = 96

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gtttgattgagccgtgccaatatca 84
          |||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89




>48367_bna-miR171e:pmrd
          Length = 92

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gtttgattgagccgtgccaatatca 84
          |||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88




>48366_bna-miR171d:pmrd
          Length = 96

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 gtttgattgagccgtgccaatatca 84
          |||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89




>55029_zma-miR171b:pmrd
          Length = 85

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 61 tttgattgagccgtgccaatatca 84
          ||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83




>54830_vvi-miR171c:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 61 tttgattgagccgtgccaatatca 84
          ||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91




>54462_sbi-miR171k:pmrd
          Length = 87

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 61 tttgattgagccgtgccaatatca 84
          ||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83




>48897_osa-miR171c:pmrd
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 61 tttgattgagccgtgccaatatca 84
          ||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatca 90




>48896_osa-miR171b:pmrd
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 61 tttgattgagccgtgccaatatca 84
          ||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91




>48723_mtr-miR171g:pmrd
          Length = 105

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 60  gtttgattgagccgtgccaatatc 83
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>48722_mtr-miR171d:pmrd
          Length = 105

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 60  gtttgattgagccgtgccaatatc 83
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>48312_bdi-miR171c:pmrd
          Length = 86

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 61 tttgattgagccgtgccaatatca 84
          ||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85




>46979_ath-miR171c:pmrd
          Length = 116

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 61  tttgattgagccgtgccaatatca 84
           ||||||||||||||||||||||||
Sbjct: 85  tttgattgagccgtgccaatatca 108




>46880_aqc-miR171e:pmrd
          Length = 102

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 60 gtttgattgagccgtgccaatatc 83
          ||||||||||||||||||||||||
Sbjct: 24 gtttgattgagccgtgccaatatc 1




>46876_aqc-miR171a:pmrd
          Length = 102

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 60  gtttgattgagccgtgccaatatc 83
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>55036_zma-miR171i:pmrd
          Length = 104

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 ttgattgagccgtgccaatatca 84
          |||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatca 86




>55033_zma-miR171f:pmrd
          Length = 155

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  ttgattgagccgtgccaatatca 84
           |||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136




>51692_ptc-miR171i:pmrd
          Length = 129

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 61  tttgattgagccgtgccaatatc 83
           |||||||||||||||||||||||
Sbjct: 98  tttgattgagccgtgccaatatc 120




>51690_ptc-miR171g:pmrd
          Length = 100

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 50 gggtgttttagtttgattgagccgtgccaatatca 84
          |||| ||||| | ||||||||||||||||||||||
Sbjct: 58 gggtcttttaatctgattgagccgtgccaatatca 92




>46879_aqc-miR171d:pmrd
          Length = 106

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 61  tttgattgagccgtgccaatatc 83
           |||||||||||||||||||||||
Sbjct: 82  tttgattgagccgtgccaatatc 104




>55039_zma-miR171m:pmrd
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 62  ttgattgagccgtgccaatatc 83
           ||||||||||||||||||||||
Sbjct: 92  ttgattgagccgtgccaatatc 113




>55037_zma-miR171j:pmrd
          Length = 129

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  tgattgagccgtgccaatatca 84
           ||||||||||||||||||||||
Sbjct: 90  tgattgagccgtgccaatatca 111




>55024_zma-miR170m:pmrd
          Length = 115

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 62  ttgattgagccgtgccaatatc 83
           ||||||||||||||||||||||
Sbjct: 94  ttgattgagccgtgccaatatc 115




>54828_vvi-miR171a:pmrd
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 tgattgagccgtgccaatatca 84
          ||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89




>54453_sbi-miR171b:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  tgattgagccgtgccaatatca 84
           ||||||||||||||||||||||
Sbjct: 93  tgattgagccgtgccaatatca 114




>51691_ptc-miR171h:pmrd
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 2  gatgttggaatggctcaatcaaatcagatctccc 35
          |||||||| |||||||||||| |||| |||||||
Sbjct: 11 gatgttgggatggctcaatcatatcaaatctccc 44



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 tgattgagccgtgccaatatca 84
          ||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92




>49676_osa-miRf10461-akr:pmrd
          Length = 123

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  tgattgagccgtgccaatatca 84
           ||||||||||||||||||||||
Sbjct: 95  tgattgagccgtgccaatatca 116




>48900_osa-miR171f:pmrd
          Length = 127

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  tgattgagccgtgccaatatca 84
           ||||||||||||||||||||||
Sbjct: 97  tgattgagccgtgccaatatca 118




>46877_aqc-miR171b:pmrd
          Length = 77

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 4  tgttggaatggctcaatcaaat 25
          ||||||||||||||||||||||
Sbjct: 3  tgttggaatggctcaatcaaat 24



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 tgattgagccgtgccaatatca 84
          ||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatca 76




>55032_zma-miR171e:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  tgattgagccgtgccaatatc 83
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>55031_zma-miR171d:pmrd
          Length = 121

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  tgattgagccgtgccaatatc 83
           |||||||||||||||||||||
Sbjct: 82  tgattgagccgtgccaatatc 102




>54680_tae-miR170b:pmrd
          Length = 94

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 tgattgagccgtgccaatatc 83
          |||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatc 94




>54579_smo-miR171a:pmrd
          Length = 135

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  gattgagccgtgccaatatca 84
           |||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatca 123




>54460_sbi-miR171i:pmrd
          Length = 90

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 tgattgagccgtgccaatatc 83
          |||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88




>54455_sbi-miR171d:pmrd
          Length = 154

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  tgattgagccgtgccaatatc 83
           |||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135




>52725_ptc-miRf10903-akr:pmrd
          Length = 85

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 tgattgagccgtgccaatatc 83
          |||||||||||||||||||||
Sbjct: 60 tgattgagccgtgccaatatc 80




>51689_ptc-miR171f:pmrd
          Length = 130

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  tgattgagccgtgccaatatc 83
           |||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121




>51688_ptc-miR171e:pmrd
          Length = 94

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 tgattgagccgtgccaatatc 83
          |||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatc 85




>48905_osa-miR171n:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 tgattgagccgtgccaatatc 83
          |||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99




>48904_osa-miR171m:pmrd
          Length = 107

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  tgattgagccgtgccaatatc 83
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>48899_osa-miR171e:pmrd
          Length = 119

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  tgattgagccgtgccaatatc 83
           |||||||||||||||||||||
Sbjct: 89  tgattgagccgtgccaatatc 109




>48898_osa-miR171d:pmrd
          Length = 135

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  tgattgagccgtgccaatatc 83
           |||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125




>48894_osa-miR170b:pmrd
          Length = 107

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  tgattgagccgtgccaatatc 83
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>48893_osa-miR170a:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 tgattgagccgtgccaatatc 83
          |||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99




>48663_hvv-miR171:pmrd
          Length = 78

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 tgattgagccgtgccaatatc 83
          |||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78




>48662_hvv-miR170:pmrd
          Length = 78

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 tgattgagccgtgccaatatc 83
          |||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78




>48406_bra-miR171d:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 64 gattgagccgtgccaatatca 84
          |||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatca 91




>48405_bra-miR171c:pmrd
          Length = 88

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 64 gattgagccgtgccaatatca 84
          |||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatca 85




>48404_bra-miR171b:pmrd
          Length = 104

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 64 gattgagccgtgccaatatca 84
          |||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatca 92




>48365_bna-miR171c:pmrd
          Length = 88

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 64 gattgagccgtgccaatatca 84
          |||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatca 85




>48364_bna-miR171b:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 64 gattgagccgtgccaatatca 84
          |||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatca 91




>48363_bna-miR171a:pmrd
          Length = 104

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 64 gattgagccgtgccaatatca 84
          |||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatca 92




>46978_ath-miR171b:pmrd
          Length = 117

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 64 gattgagccgtgccaatatca 84
          |||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatca 96