miRNEST 2.0, an integrative microRNA resource :: BLAST
>51650_ptc-miR168a:pmrd
Length = 160
Score = 208 bits (105), Expect = 8e-55
Identities = 133/144 (92%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggctcgacatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggctcgacatgac 70
Query: 61 tggttgttgtggaaaaagaaaaggaaggaaataggnnnnnnnnnncaaagaatagcgaat 120
||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 71 tggttgttgtggaaaaagaaaaggaaggaaacagg--aaaaaaaacaaagaatagcgaat 128
Query: 121 tggatcccgccttgcatcaactga 144
||||||||||||||||||||||||
Sbjct: 129 tggatcccgccttgcatcaactga 152
>54375_pts-miR168b:pmrd
Length = 140
Score = 184 bits (93), Expect = 1e-47
Identities = 130/144 (90%), Gaps = 4/144 (2%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggctcgacatgac 60
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggctggacatgac 60
Query: 61 tggttgttgtggaaaaagaaaaggaaggaaataggnnnnnnnnnncaaagaatagcgaat 120
|||||||| |||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 61 tggttgttatggaaaaagaaaaggaaggaaacagg----aaaaaacaaagaatagcgaat 116
Query: 121 tggatcccgccttgcatcaactga 144
||||||||||||||||||||||||
Sbjct: 117 tggatcccgccttgcatcaactga 140
>51651_ptc-miR168b:pmrd
Length = 136
Score = 101 bits (51), Expect = 1e-22
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggct 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggct 61
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 117 gaattggatcccgccttgcatcaactga 144
||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactga 128
>54374_pts-miR168a:pmrd
Length = 118
Score = 85.7 bits (43), Expect = 8e-18
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggct 51
|||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattctgcgatttcattgccagatggct 51
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 117 gaattggatcccgccttgcatcaactga 144
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
>54366_ptr-miR168:pmrd
Length = 118
Score = 85.7 bits (43), Expect = 8e-18
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggct 51
|||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattctgcgatttcattgccagatggct 51
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 117 gaattggatcccgccttgcatcaactga 144
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
>48560_gma-miR168:pmrd
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 116 cgaattggatcccgccttgcatcaactga 144
|||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactga 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaac 40
>54388_rco-miR168:pmrd
Length = 156
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 117 gaattggatcccgccttgcatcaactga 144
||||||||||||||||||||||||||||
Sbjct: 110 gaattggatcccgccttgcatcaactga 137
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactgatt 45
>48349_bna-miR168:pmrd
Length = 133
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactgatt 44
>46958_ath-miR168b:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgatt 27
|||||||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaactgatt 45
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 119 attggatcccgccttgcatcaactga 144
||||||||||||||||||||||||||
Sbjct: 91 attggatcccgccttgcatcaactga 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggc 31
|||||||||||||||||||||| |||||||
Sbjct: 13 tcgcttggtgcaggtcgggaaccaattcggc 43
>46959_ath-miR168m:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 119 attggatcccgccttgcatcaactga 144
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggc 31
|||||||||||||||||||||| |||||||
Sbjct: 1 tcgcttggtgcaggtcgggaaccaattcggc 31
>46957_ath-miR168a:pmrd
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 119 attggatcccgccttgcatcaactga 144
||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactga 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggc 31
|||||||||||||||||||||| |||||||
Sbjct: 18 tcgcttggtgcaggtcgggaaccaattcggc 48
>54546_sly-miR168:pmrd
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgattcggcg 32
|||||||||||||||||||| || ||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacctcattcggcg 32
>48649_hte-miR168:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
>54802_vvi-miR168:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 gatcccgccttgcatcaactga 144
||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactga 120
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 120 ttggatcccgccttgcatcaactga 144
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
