miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54654_ssp-miR167:pmrd
Length = 139
Score = 268 bits (135), Expect = 1e-72
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatggtggtatatatgaatatatgatgtctttacctctgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctgatggtggtatatatgaatatatgatgtctttacctctgatc 62
Query: 61 tctccctgactgtcacggatcgatgaatccaggatgaggggagggaataatgagcatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tctccctgactgtcacggatcgatgaatccaggatgaggggagggaataatgagcatcag 122
Query: 121 gtcatgctgtagttt 135
|||||||||||||||
Sbjct: 123 gtcatgctgtagttt 137
>54635_sof-miR167b:pmrd
Length = 188
Score = 210 bits (106), Expect = 2e-55
Identities = 134/145 (92%), Gaps = 10/145 (6%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatggtggtatatatgaatatatgatgtctttacctctgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctgatggtggtatatatgaatatatgatgtctttacctctgatc 82
Query: 61 tctccctgactgtcacggatcgatgaatccaggatgaggggaggga----------ataa 110
||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 83 tctccctgactgtcacggatccatgaatccaggatgaggggagggaagaaagagggataa 142
Query: 111 tgagcatcaggtcatgctgtagttt 135
|||||||||||||||||||||||||
Sbjct: 143 tgagcatcaggtcatgctgtagttt 167
>54634_sof-miR167a:pmrd
Length = 188
Score = 202 bits (102), Expect = 5e-53
Identities = 133/145 (91%), Gaps = 10/145 (6%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatggtggtatatatgaatatatgatgtctttacctctgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctgatggtggtatatatgaatatatgatgtctttacctctgatc 82
Query: 61 tctccctgactgtcacggatcgatgaatccaggatgaggggaggga----------ataa 110
|||||||||||||||| |||| |||||||||||||||||||||||| ||||
Sbjct: 83 tctccctgactgtcaccgatccatgaatccaggatgaggggagggaagaaagagggataa 142
Query: 111 tgagcatcaggtcatgctgtagttt 135
|||||||||||||||||||||||||
Sbjct: 143 tgagcatcaggtcatgctgtagttt 167
>54431_sbi-miR167e:pmrd
Length = 179
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 104 ggaataatgagcatcaggtcatgctgtagttt 135
||||||||||||||||||||||||||||||||
Sbjct: 127 ggaataatgagcatcaggtcatgctgtagttt 158
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctgatg 44
>54430_sbi-miR167d:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctgatg 44
>50425_osa-miRf11210-akr:pmrd
Length = 112
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 14 aagctgccagcatgatctgatg 35
>50424_osa-miRf11209-akr:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 20 aagctgccagcatgatctgatg 41
>48870_osa-miR167n:pmrd
Length = 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctgatg 24
>48869_osa-miR167m:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctgatg 24
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 116 atcaggtcatgctgtagttt 135
||||||||||||||||||||
Sbjct: 79 atcaggtcatgctgtagttt 98
>48866_osa-miR167h:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctgatg 34
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 116 atcaggtcatgctgtagttt 135
||||||||||||||||||||
Sbjct: 89 atcaggtcatgctgtagttt 108
>48862_osa-miR167d:pmrd
Length = 110
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgatg 22
||||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctgatg 34
>54989_zma-miR167l:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgat 21
|||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctgat 23
>54983_zma-miR167f:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgat 21
|||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctgat 43
>54433_sbi-miR167g:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgat 21
|||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctgat 43
>48868_osa-miR167j:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgat 21
|||||||||||||||||||||
Sbjct: 28 aagctgccagcatgatctgat 48
>48864_osa-miR167f:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgat 21
|||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctgat 33
>54990_zma-miR167m:pmrd
Length = 80
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctga 22
>54982_zma-miR167e:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctga 42
>54434_sbi-miR167h:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctga 22
>54432_sbi-miR167f:pmrd
Length = 179
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctga 42
>51646_ptc-miR167e:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctga 32
>49693_osa-miRf10478-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 78 aagctgccagcatgatctga 59
>49692_osa-miRf10477-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 20 aagctgccagcatgatctga 39
>48865_osa-miR167g:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctga 32
>48678_lja-miR167:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctga 42
>48558_gma-miR167n:pmrd
Length = 64
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctga 22
>48420_cle-miR167:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctga 32
