miRNEST 2.0, an integrative microRNA resource :: BLAST
>48832_osa-miR160m:pmrd
Length = 82
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 60
Query: 61 gtggcgtgcaaggagccaagca 82
||||||||||||||||||||||
Sbjct: 61 gtggcgtgcaaggagccaagca 82
>48827_osa-miR160b:pmrd
Length = 139
Score = 155 bits (78), Expect = 6e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 89
Query: 61 gtggcgtgcaaggagccaagca 82
||||||||||||||||||||||
Sbjct: 90 gtggcgtgcaaggagccaagca 111
>54405_sbi-miR160b:pmrd
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 60
|||||||||||||| ||||||| |||||||||||| || ||| ||| |||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccgtggcgtgattggatgctgtgg 60
Query: 61 gtggcgtgcaaggagccaagca 82
||||||||||||||||||||||
Sbjct: 61 gtggcgtgcaaggagccaagca 82
>54947_zma-miR160m:pmrd
Length = 81
Score = 99.6 bits (50), Expect = 3e-22
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 60
|||||||||||||| ||||||| ||||||||| || || ||| ||| |||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcc-aacccgtggcgtgattggatgctgtgg 59
Query: 61 gtggcgtgcaaggagccaagca 82
||||||||||||||||||||||
Sbjct: 60 gtggcgtgcaaggagccaagca 81
>54939_zma-miR160b:pmrd
Length = 121
Score = 99.6 bits (50), Expect = 3e-22
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 60
|||||||||||||| ||||||| ||||||||| || || ||| ||| |||||||||||||
Sbjct: 21 tgcctggctccctgtatgccacacatgtagcc-aacccgtggcgtgattggatgctgtgg 79
Query: 61 gtggcgtgcaaggagccaagca 82
||||||||||||||||||||||
Sbjct: 80 gtggcgtgcaaggagccaagca 101
>54404_sbi-miR160a:pmrd
Length = 84
Score = 65.9 bits (33), Expect = 4e-12
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatcc--atggtgtgtttggatgctgt 58
|||||||||||||| ||||||| |||||||||||| || ||| | | ||| ||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccatatgctaaggttgcctgctgt 60
Query: 59 gggtggcgtgcaaggagccaagca 82
||||||||||||||| ||||||||
Sbjct: 61 gggtggcgtgcaaggggccaagca 84
>48826_osa-miR160a:pmrd
Length = 88
Score = 60.0 bits (30), Expect = 3e-10
Identities = 72/84 (85%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgc--tgt 58
|||||||||||||| ||||||| ||||||| |||| ||||| |||| ||| ||| |
Sbjct: 4 tgcctggctccctgtatgccacacatgtagaccaacccatg--gtgtctggttgcctact 61
Query: 59 gggtggcgtgcaaggagccaagca 82
||||||||||||||||||||||||
Sbjct: 62 gggtggcgtgcaaggagccaagca 85
>54945_zma-miR160h:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 53 tgctgtgggtggcgtgcaaggagccaagca 82
||||||||||||||||||||| ||||||||
Sbjct: 57 tgctgtgggtggcgtgcaaggggccaagca 86
>54944_zma-miR160g:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 53 tgctgtgggtggcgtgcaaggagccaagca 82
||||||||||||||||||||| ||||||||
Sbjct: 57 tgctgtgggtggcgtgcaaggggccaagca 86
>54938_zma-miR160a:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 53 tgctgtgggtggcgtgcaaggagccaagca 82
||||||||||||||||||||| ||||||||
Sbjct: 66 tgctgtgggtggcgtgcaaggggccaagca 95
>54940_zma-miR160c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 7 tgcctggctccctgtatgccactcat 32
>54759_ttu-miR160a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcat 26
>54406_sbi-miR160c:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcat 26
>51361_ppt-miR160c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccact 23
||||||||||||||||||||||
Sbjct: 12 gcctggctccctgcatgccact 33
>48828_osa-miR160c:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 7 tgcctggctccctgtatgccactcat 32
>51615_ptc-miR160h:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgcatgcca 31
>54946_zma-miR160i:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 2 tgcctggctccctgtatgccactc 25
>54942_zma-miR160e:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 9 tgcctggctccctgtatgccactc 32
>54941_zma-miR160d:pmrd
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 21 tgcctggctccctgtatgccactc 44
>54780_vvi-miR160c:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagca 82
||||||||||| ||||||||||||
Sbjct: 71 gggtggcgtgcgaggagccaagca 94
>54675_tae-miR160:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 22 tgcctggctccctgtatgccactc 45
>54408_sbi-miR160e:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>54407_sbi-miR160d:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>48833_osa-miR160n:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>48829_osa-miR160d:pmrd
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 8 tgcctggctccctgtatgccactc 31
>48791_oba-miR160:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagca 82
||||||||||| ||||||||||||
Sbjct: 64 gggtggcgtgcgaggagccaagca 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccact 23
|||||||||||||| ||||||||
Sbjct: 4 tgcctggctccctgtatgccact 26
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 ggtggcgtgcaaggagccaagca 82
|||||||||| ||||||||||||
Sbjct: 74 ggtggcgtgcgaggagccaagca 96
>51611_ptc-miR160d:pmrd
Length = 103
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 ggtggcgtgcaaggagccaagca 82
|||||||||| ||||||||||||
Sbjct: 73 ggtggcgtgcgaggagccaagca 95
>51608_ptc-miR160a:pmrd
Length = 102
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 60 ggtggcgtgcaaggagccaagca 82
|||||||||| ||||||||||||
Sbjct: 72 ggtggcgtgcgaggagccaagca 94
>51363_ppt-miR160e:pmrd
Length = 138
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccact 23
|||||||||||||| ||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>51362_ppt-miR160d:pmrd
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgcc 20
|||||||||||||||||||
Sbjct: 12 gcctggctccctgcatgcc 30
