miRNEST 2.0, an integrative microRNA resource :: BLAST
>54691_tae-miR444:pmrd
Length = 426
Score = 83.8 bits (42), Expect = 3e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 85 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcctgttgccaaag 138
||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135 ttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaaag 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 16 ggcagcaagctagaggtggcaactgcataatttgcaagaaa 56
||||||||||| |||| |||||||||| | ||||||||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaa 134
>54743_tae-miR2024b:pmrd
Length = 142
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 85 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 127
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 100 ttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 142
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 16 ggcagcaagctagaggtggcaactgcataatttgcaagaaa 56
||||||||||| |||| |||||||||| | ||||||||||
Sbjct: 139 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaa 99
>49006_osa-miR444e:pmrd
Length = 140
Score = 73.8 bits (37), Expect = 3e-14
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 22 aagctagaggtggcaactgcataatttgcaagaaa-ttgttggctgaagatcataccgat 80
|||||||||| ||||||||||| |||| ||||| ||||||| ||| |||| | || ||
Sbjct: 22 aagctagaggcaccaactgcataacttgcgagaaacttgttggatgatgatcttgccaat 81
Query: 81 gatattcttgcaagttatgcagttgctgcctcaagcttgctgcct 125
||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 82 gattttgccgcaagttatgcagttgctgcctcaagcttactgcct 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 85 ttcttgcaagttatgcagttgctgcctcaagctt 118
|||| |||||||||||||||| |||||| |||||
Sbjct: 55 ttctcgcaagttatgcagttggtgcctctagctt 22
>54376_pvi-miR444:pmrd
Length = 127
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 72 cataccgatgatattcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 127
|||||| ||||| |||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 65 catacctatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 120
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 85 ttcttgcaagttatgcagttgctgcctcaagcttg 119
|||||||||| ||||||||||||||||| ||||||
Sbjct: 49 ttcttgcaagatatgcagttgctgcctctagcttg 15
>49007_osa-miR444f:pmrd
Length = 154
Score = 69.9 bits (35), Expect = 5e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 85 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 127
|||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 111 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
>48798_oru-miR444:pmrd
Length = 165
Score = 69.9 bits (35), Expect = 5e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 85 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 127
|||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 116 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 158
>48319_bdi-miR444:pmrd
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 92 aagttatgcagttgctgcctcaagcttgctgc 123
||||||||||||||||||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
>55114_zma-miR444a:pmrd
Length = 138
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 103 ttgctgcctcaagcttgctgcctcctgttgccaaa 137
||||||||||||||||||||||||| ||||||||
Sbjct: 1 ttgctgcctcaagcttgctgcctccctttgccaaa 35
>54742_tae-miR2024a:pmrd
Length = 118
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 85 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 127
|||| ||||||| ||||||||||| ||||||||||||| ||||
Sbjct: 76 ttctcgcaagttgtgcagttgctgtctcaagcttgctgactcc 118
>55115_zma-miR444b:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 103 ttgctgcctcaagcttgctgcctcctgttgccaaag 138
|||||||||||||||| |||||||| |||||||||
Sbjct: 1 ttgctgcctcaagcttcctgcctccctttgccaaag 36
