miRNEST 2.0, an integrative microRNA resource :: BLAST
>54691_tae-miR444:pmrd
Length = 426
Score = 75.8 bits (38), Expect = 5e-15
Identities = 77/90 (85%), Gaps = 5/90 (5%)
Strand = Plus / Plus
Query: 17 ctgcattacttgcaagaaaggcacaaaatcattagatgat-----tacttgtggctttct 71
||||||||||||||| ||||| |||||| | |||| ||| |||||||||||||||
Sbjct: 79 ctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttct 138
Query: 72 tgcaagttgtgcagttgctgcctcaagctt 101
||||||| |||||||||||||||||||||
Sbjct: 139 tgcaagtcatgcagttgctgcctcaagctt 168
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 2 agcatgaggcaacaactgcattacttgc 29
||||||||||||||||||||||||||||
Sbjct: 29 agcatgaggcaacaactgcattacttgc 56
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaacaactgcattacttgcaagaaaggcacaa 42
|||| ||||||| ||||||||| ||||||||||||| |||||
Sbjct: 168 aagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
>54743_tae-miR2024b:pmrd
Length = 142
Score = 73.8 bits (37), Expect = 2e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 57 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 101
|||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 89 tacttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 133
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 2 agcatgaggcaacaactgcattacttgc 29
||||||||||||||||||||||||||||
Sbjct: 11 agcatgaggcaacaactgcattacttgc 38
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaacaactgcattacttgcaagaaaggcacaa 42
|||| ||||||| ||||||||| ||||||||||||| |||||
Sbjct: 133 aagcttgaggcagcaactgcatgacttgcaagaaagccacaa 92
>54742_tae-miR2024a:pmrd
Length = 118
Score = 71.9 bits (36), Expect = 8e-14
Identities = 87/103 (84%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatgat--ta 58
||||||||||| |||||||||||||||||||| ||| |||||||| | | | || ||
Sbjct: 7 aagcatgaggcgacaactgcattacttgcaaggaagttacaaaatctatgggtcatcata 66
Query: 59 cttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 101
| ||| |||||| ||||||||||||||||||| |||||||||
Sbjct: 67 atcgtgactttctcgcaagttgtgcagttgctgtctcaagctt 109
>49007_osa-miR444f:pmrd
Length = 154
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 66 ctttcttgcaagttgtgcagttgctgcctcaagctt 101
||||||||||||||||||||||| ||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagctt 144
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaacaactgcattacttgcaag 32
|||||||||| ||||||||||||||||||||
Sbjct: 12 aagcatgaggttacaactgcattacttgcaag 43
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaacaactgcattacttgcaagaaag 36
|||| |||||||||||||||| |||||||||||||
Sbjct: 144 aagcttgaggcaacaactgcacaacttgcaagaaag 109
>48798_oru-miR444:pmrd
Length = 165
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 66 ctttcttgcaagttgtgcagttgctgcctcaagctt 101
||||||||||||||||||||||| ||||||||||||
Sbjct: 114 ctttcttgcaagttgtgcagttgttgcctcaagctt 149
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaacaactgcattacttgcaag 32
|||||||||| ||||||||||||||||||||
Sbjct: 17 aagcatgaggttacaactgcattacttgcaag 48
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaacaactgcattacttgcaagaaag 36
|||| |||||||||||||||| |||||||||||||
Sbjct: 149 aagcttgaggcaacaactgcacaacttgcaagaaag 114
>54376_pvi-miR444:pmrd
Length = 127
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 67 tttcttgcaagttgtgcagttgctgcctcaagctt 101
|||||||||||||||||||||| || |||||||||
Sbjct: 77 tttcttgcaagttgtgcagttgttgtctcaagctt 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 67 tttcttgcaagttgtgcagttgctgcctcaagctt 101
||||||||||| | ||||||||||||||| |||||
Sbjct: 50 tttcttgcaagatatgcagttgctgcctctagctt 16
>49006_osa-miR444e:pmrd
Length = 140
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 73 gcaagttgtgcagttgctgcctcaagctt 101
||||||| |||||||||||||||||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagctt 119
>48319_bdi-miR444:pmrd
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 aagttgtgcagttgctgcctcaagctt 101
||||| |||||||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagctt 105
