miRNEST 2.0, an integrative microRNA resource :: BLAST
>46887_aqc-miR396a:pmrd
Length = 122
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 62 ctttgcggttcaataaagctgtggga 87
||||||||||||||||||||||||||
Sbjct: 95 ctttgcggttcaataaagctgtggga 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcatgg 26
|||||| |||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatgg 26
>48680_lja-miR396:pmrd
Length = 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tttgcggttcaataaagctgtggga 87
|||||||||||||||||||||||||
Sbjct: 70 tttgcggttcaataaagctgtggga 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 16 ttccacagctttcttgaactgcat 39
>48578_gma-miR396a:pmrd
Length = 140
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tttgcggttcaataaagctgtggga 87
|||||||||||||||||||||||||
Sbjct: 97 tttgcggttcaataaagctgtggga 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
>48486_gcl-miR396b:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tttgcggttcaataaagctgtggga 87
|||||||||||||||||||||||||
Sbjct: 77 tttgcggttcaataaagctgtggga 101
>48485_gcl-miR396a:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 63 tttgcggttcaataaagctgtggga 87
|||||||||||||||||||||||||
Sbjct: 25 tttgcggttcaataaagctgtggga 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 101 ttccacagctttcttgaactgcat 78
>48110_ath-miRf11010-akr:pmrd
Length = 165
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tttgcggttcaataaagctgtggga 87
|||||||||||||||||||||||||
Sbjct: 124 tttgcggttcaataaagctgtggga 148
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgca 23
|||||| ||||||||||||||||
Sbjct: 18 ttccacagctttcttgaactgca 40
>47008_ath-miR396a:pmrd
Length = 151
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 tttgcggttcaataaagctgtggga 87
|||||||||||||||||||||||||
Sbjct: 117 tttgcggttcaataaagctgtggga 141
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgca 23
|||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>54871_vvi-miR396d:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgcggttcaataaagctgtggga 87
||||||||||||||||||||||||
Sbjct: 85 ttgcggttcaataaagctgtggga 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34
>51734_ptc-miR396a:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgcggttcaataaagctgtggga 87
||||||||||||||||||||||||
Sbjct: 92 ttgcggttcaataaagctgtggga 115
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgca 23
|||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>48508_ghr-miR396c:pmrd
Length = 115
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgcggttcaataaagctgtggga 87
||||||||||||||||||||||||
Sbjct: 92 ttgcggttcaataaagctgtggga 115
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgca 23
|||||| ||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
>48507_ghr-miR396b:pmrd
Length = 115
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ttgcggttcaataaagctgtggga 87
||||||||||||||||||||||||
Sbjct: 92 ttgcggttcaataaagctgtggga 115
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgca 23
|||||| ||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
>52079_ptc-miRf10257-akr:pmrd
Length = 130
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tgcggttcaataaagctgtggga 87
|||||||||||||||||||||||
Sbjct: 100 tgcggttcaataaagctgtggga 122
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgca 23
|||||| ||||||||||||||||
Sbjct: 9 ttccacagctttcttgaactgca 31
>51735_ptc-miR396b:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tgcggttcaataaagctgtggga 87
|||||||||||||||||||||||
Sbjct: 102 tgcggttcaataaagctgtggga 124
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgca 23
|||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>55081_zma-miR396j:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcatg 25
|||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatg 25
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 80 gttcaataaagctgtggga 98
>55080_zma-miR396i:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcatg 25
|||||| ||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatg 25
>55074_zma-miR396c:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcatg 25
|||||| ||||||||||||||||||
Sbjct: 4 ttccacagctttcttgaactgcatg 28
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 83 gttcaataaagctgtggga 101
>55072_zma-miR396a:pmrd
Length = 137
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcatg 25
|||||| ||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatg 45
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 100 gttcaataaagctgtggga 118
>54485_sbi-miR396a:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcatg 25
|||||| ||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatg 45
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 88 gttcaataaagctgtggga 106
>52919_ptc-miRf11097-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 ttccacggctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 112 ttccacggctttcttgaactg 92
>51739_ptc-miR396f:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 11 ttccacggctttcttgaactg 31
>55083_zma-miR396l:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 79 gttcaataaagctgtggga 97
>55079_zma-miR396h:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 4 ttccacagctttcttgaactgcat 27
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 95 gttcaataaagctgtggga 113
>55073_zma-miR396b:pmrd
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 99 gttcaataaagctgtggga 117
>54645_sof-miR396:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 97 gttcaataaagctgtggga 115
>54486_sbi-miR396b:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 91 gttcaataaagctgtggga 109
>52339_ptc-miRf10517-akr:pmrd
Length = 164
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 8 ttccacggctttcttgaact 27
>52304_ptc-miRf10482-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 10 ttccacggctttcttgaact 29
>51740_ptc-miR396g:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacggctttcttgaact 30
>51736_ptc-miR396c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 94 ttccacggctttcttgaact 75
>48946_osa-miR396b:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgcat 24
|||||| |||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 88 gttcaataaagctgtggga 106
>55082_zma-miR396k:pmrd
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 80 gttcaataaagctgtggga 98
>54584_smo-miR396:pmrd
Length = 168
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaac 19
|||||||||||||||||||
Sbjct: 11 ttccacggctttcttgaac 29
>48945_osa-miR396a:pmrd
Length = 154
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactgca 23
|||||| ||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 gttcaataaagctgtggga 87
|||||||||||||||||||
Sbjct: 126 gttcaataaagctgtggga 144
