miRNEST 2.0, an integrative microRNA resource :: BLAST
>54691_tae-miR444:pmrd
Length = 426
Score = 105 bits (53), Expect = 9e-24
Identities = 95/109 (87%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 37 ctgcattacttgcaagaaaggcacaaaatcattagatgat-----tacttgtggctttct 91
||||||||||||||| ||||| |||||| | |||| ||| |||||||||||||||
Sbjct: 79 ctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttct 138
Query: 92 tgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgccaaa 140
||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 139 tgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgccaaa 187
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 15 ggcaccaagcatgaggcaacaactgcattacttgc 49
|||||| ||||||||||||||||||||||||||||
Sbjct: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 15 ggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaa 62
|||| ||||| ||||||| ||||||||| ||||||||||||| |||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
>54742_tae-miR2024a:pmrd
Length = 118
Score = 93.7 bits (47), Expect = 3e-20
Identities = 101/118 (85%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 15 ggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatg 74
||||||||||||||||| |||||||||||||||||||| ||| |||||||| | | |
Sbjct: 1 ggcaccaagcatgaggcgacaactgcattacttgcaaggaagttacaaaatctatgggtc 60
Query: 75 at--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 130
|| || | ||| |||||| ||||||||||||||||||| ||||||||||||| ||||
Sbjct: 61 atcataatcgtgactttctcgcaagttgtgcagttgctgtctcaagcttgctgactcc 118
>54743_tae-miR2024b:pmrd
Length = 142
Score = 91.7 bits (46), Expect = 1e-19
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 77 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 130
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 89 tacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 142
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 15 ggcaccaagcatgaggcaacaactgcattacttgc 49
|||||| ||||||||||||||||||||||||||||
Sbjct: 4 ggcaccgagcatgaggcaacaactgcattacttgc 38
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 15 ggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaa 62
|||| ||||| ||||||| ||||||||| ||||||||||||| |||||
Sbjct: 139 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 92
>48798_oru-miR444:pmrd
Length = 165
Score = 83.8 bits (42), Expect = 3e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 86 ctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctg 135
||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 114 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccgtctg 163
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 5 tgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaag 52
|||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgcatatggtggcaccaagcatgaggttacaactgcattacttgcaag 48
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 15 ggcaccaagcatgaggcaacaactgcattacttgcaagaaag 56
|||| ||||| |||||||||||||||| |||||||||||||
Sbjct: 155 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaag 114
>49007_osa-miR444f:pmrd
Length = 154
Score = 81.8 bits (41), Expect = 1e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 86 ctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctcc 130
||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 69.9 bits (35), Expect = 5e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 10 atggtggcaccaagcatgaggcaacaactgcattacttgcaag 52
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 atggtggcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 15 ggcaccaagcatgaggcaacaactgcattacttgcaagaaag 56
|||| ||||| |||||||||||||||| |||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaag 109
>54376_pvi-miR444:pmrd
Length = 127
Score = 77.8 bits (39), Expect = 2e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 87 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgcc 137
|||||||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct: 77 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcc 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 87 tttcttgcaagttgtgcagttgctgcctcaagcttg 122
||||||||||| | ||||||||||||||| ||||||
Sbjct: 50 tttcttgcaagatatgcagttgctgcctctagcttg 15
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 15 ggcaccaagcatgaggcaacaactgcattacttgcaagaaa 55
|||| ||||| |||| ||||||||||| ||||||||||||
Sbjct: 117 ggcagcaagcttgagacaacaactgcacaacttgcaagaaa 77
>55114_zma-miR444a:pmrd
Length = 138
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 106 ttgctgcctcaagcttgctgcctccctctgccaaa 140
||||||||||||||||||||||||||| |||||||
Sbjct: 1 ttgctgcctcaagcttgctgcctccctttgccaaa 35
>49006_osa-miR444e:pmrd
Length = 140
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 93 gcaagttgtgcagttgctgcctcaagcttgctgcct 128
||||||| ||||||||||||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>48319_bdi-miR444:pmrd
Length = 110
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 95 aagttgtgcagttgctgcctcaagcttgctgc 126
||||| ||||||||||||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
>55115_zma-miR444b:pmrd
Length = 174
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 106 ttgctgcctcaagcttgctgcctccctctgccaaa 140
|||||||||||||||| |||||||||| |||||||
Sbjct: 1 ttgctgcctcaagcttcctgcctccctttgccaaa 35
