miRNEST 2.0, an integrative microRNA resource :: BLAST
>48798_oru-miR444:pmrd
Length = 165
Score = 327 bits (165), Expect = 2e-90
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 10 tgcatatggtggcaccaagcatgaggttacaactgcattacttgcaagggaatcacaagt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcatatggtggcaccaagcatgaggttacaactgcattacttgcaagggaatcacaagt 60
Query: 70 cacaagaaacacatgttattacaatggataatcaatgggtcatcatactatgactttctt 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacaagaaacacatgttattacaatggataatcaatgggtcatcatactatgactttctt 120
Query: 130 gcaagttgtgcagttgttgcctcaagcttgctgcctccgtctgtc 174
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaagttgtgcagttgttgcctcaagcttgctgcctccgtctgtc 165
>49007_osa-miR444f:pmrd
Length = 154
Score = 305 bits (154), Expect = 6e-84
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 15 atggtggcaccaagcatgaggttacaactgcattacttgcaagggaatcacaagtcacaa 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggtggcaccaagcatgaggttacaactgcattacttgcaagggaatcacaagtcacaa 60
Query: 75 gaaacacatgttattacaatggataatcaatgggtcatcatactatgactttcttgcaag 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaacacatgttattacaatggataatcaatgggtcatcatactatgactttcttgcaag 120
Query: 135 ttgtgcagttgttgcctcaagcttgctgcctccg 168
||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgtgcagttgttgcctcaagcttgctgcctccg 154
>54376_pvi-miR444:pmrd
Length = 127
Score = 85.7 bits (43), Expect = 1e-17
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 117 ctatgactttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 167
|||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 70 ctatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 120
Score = 40.1 bits (20), Expect = 6e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 124 tttcttgcaagttgtgcagttgttgcctcaagcttg 159
||||||||||| | |||||||| |||||| ||||||
Sbjct: 50 tttcttgcaagatatgcagttgctgcctctagcttg 15
>54742_tae-miR2024a:pmrd
Length = 118
Score = 67.9 bits (34), Expect = 3e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 99 aatcaatgggtcatcatacta-tgactttcttgcaagttgtgcagttgttgcctcaagct 157
|||| ||||||||||||| | ||||||||| |||||||||||||||| || ||||||||
Sbjct: 49 aatctatgggtcatcataatcgtgactttctcgcaagttgtgcagttgctgtctcaagct 108
Query: 158 tgctgcctcc 167
||||| ||||
Sbjct: 109 tgctgactcc 118
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 20 ggcaccaagcatgaggttacaactgcattacttgcaagg 58
|||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ggcaccaagcatgaggcgacaactgcattacttgcaagg 39
>54743_tae-miR2024b:pmrd
Length = 142
Score = 65.9 bits (33), Expect = 1e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 123 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 167
||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 98 ctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 142
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 ggcaccaagcatgaggttacaactgcattacttgc 54
|||||| ||||||||| |||||||||||||||||
Sbjct: 4 ggcaccgagcatgaggcaacaactgcattacttgc 38
>54691_tae-miR444:pmrd
Length = 426
Score = 65.9 bits (33), Expect = 1e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 123 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 167
||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 133 ctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 177
Score = 50.1 bits (25), Expect = 6e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 10 tgcatatggtggcaccaagcatgaggttacaactgcattacttgc 54
||||| ||| |||||| ||||||||| |||||||||||||||||
Sbjct: 12 tgcatgtggcggcaccgagcatgaggcaacaactgcattacttgc 56
>49006_osa-miR444e:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 130 gcaagttgtgcagttgttgcctcaagcttgctgcct 165
||||||| |||||||| |||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>48319_bdi-miR444:pmrd
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 132 aagttgtgcagttgttgcctcaagcttgctgc 163
||||| |||||||| |||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
>55114_zma-miR444a:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 147 tgcctcaagcttgctgcctcc 167
|||||||||||||||||||||
Sbjct: 5 tgcctcaagcttgctgcctcc 25
