miRNEST 2.0, an integrative microRNA resource :: BLAST
>48945_osa-miR396a:pmrd
Length = 154
Score = 258 bits (130), Expect = 9e-70
Identities = 133/134 (99%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcacgcatgatgaataatccctttggttaattgtgatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcacgcatgatgaataatccctttggttaattgtgatctg 70
Query: 61 gtctctgagagatcgtagctagactcgatcggttgcattggcatcagagagagcagttca 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gtctctgagagatcgtagttagactcgatcggttgcattggcatcagagagagcagttca 130
Query: 121 ataaagctgtggga 134
||||||||||||||
Sbjct: 131 ataaagctgtggga 144
>52079_ptc-miRf10257-akr:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcac 24
||||||||||||||||||||||||
Sbjct: 9 ttccacagctttcttgaactgcac 32
>51735_ptc-miR396b:pmrd
Length = 132
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcac 24
||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcac 34
>51734_ptc-miR396a:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgcac 24
||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcac 34
>55083_zma-miR396l:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 76 gcagttcaataaagctgtggga 97
>55081_zma-miR396j:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 77 gcagttcaataaagctgtggga 98
>55080_zma-miR396i:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
>55079_zma-miR396h:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 4 ttccacagctttcttgaactgca 26
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 agagagcagttcaataaagctgtggga 134
|||| ||||||||||||||||||||||
Sbjct: 87 agagggcagttcaataaagctgtggga 113
>55074_zma-miR396c:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 4 ttccacagctttcttgaactgca 26
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 80 gcagttcaataaagctgtggga 101
>55073_zma-miR396b:pmrd
Length = 136
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 96 gcagttcaataaagctgtggga 117
>55072_zma-miR396a:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 97 gcagttcaataaagctgtggga 118
>54871_vvi-miR396d:pmrd
Length = 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>54645_sof-miR396:pmrd
Length = 134
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 94 gcagttcaataaagctgtggga 115
>54486_sbi-miR396b:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 88 gcagttcaataaagctgtggga 109
>54485_sbi-miR396a:pmrd
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 85 gcagttcaataaagctgtggga 106
>48946_osa-miR396b:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 85 gcagttcaataaagctgtggga 106
>48680_lja-miR396:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaactgca 38
>48578_gma-miR396a:pmrd
Length = 140
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgca 43
>48508_ghr-miR396c:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
>48507_ghr-miR396b:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
>48485_gcl-miR396a:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 101 ttccacagctttcttgaactgca 79
>48110_ath-miRf11010-akr:pmrd
Length = 165
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 18 ttccacagctttcttgaactgca 40
>47008_ath-miR396a:pmrd
Length = 151
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>46887_aqc-miR396a:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgca 23
|||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgca 23
>55082_zma-miR396k:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactgc 22
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgc 22
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gcagttcaataaagctgtggga 134
||||||||||||||||||||||
Sbjct: 77 gcagttcaataaagctgtggga 98
>54870_vvi-miR396c:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactg 21
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactg 31
>55078_zma-miR396g:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>55077_zma-miR396f:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>54869_vvi-miR396b:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54868_vvi-miR396a:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54487_sbi-miR396c:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>53179_ptc-miRf11357-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
>52893_ptc-miRf11071-akr:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 142 ttccacagctttcttgaact 123
>52304_ptc-miRf10482-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 93 ttccacagctttcttgaact 74
>52080_ptc-miRf10258-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
>51738_ptc-miR396e:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51737_ptc-miR396d:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51736_ptc-miR396c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51564_pta-miR396:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
>48947_osa-miR396c:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>48748_mtr-miR396a:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>48580_gma-miR396c:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48579_gma-miR396b:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48374_bna-miR396a:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>47009_ath-miR396b:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>46888_aqc-miR396b:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
