miRNEST 2.0, an integrative microRNA resource :: BLAST
>54831_vvi-miR171d:pmrd
Length = 100
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 50 tgttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||||
Sbjct: 60 tgttgtttgattgagccgtgccaatat 86
>51685_ptc-miR171b:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 43 agagctatgttgtttgattgagccgtgccaatat 76
|||||| | |||||||||||||||||||||||||
Sbjct: 57 agagctctattgtttgattgagccgtgccaatat 90
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 15 atattggtgcggttcaatc 33
>46880_aqc-miR171e:pmrd
Length = 102
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 51 gttgtttgattgagccgtgccaatat 76
||||||||||||||||||||||||||
Sbjct: 27 gttgtttgattgagccgtgccaatat 2
>46876_aqc-miR171a:pmrd
Length = 102
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 gttgtttgattgagccgtgccaatat 76
||||||||||||||||||||||||||
Sbjct: 74 gttgtttgattgagccgtgccaatat 99
>51882_ptc-miRf10060-akr:pmrd
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 58 ttgtttgattgagccgtgccaatat 82
>51684_ptc-miR171a:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 67 ttgtttgattgagccgtgccaatat 91
>48403_bra-miR171a:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 57 ttgtttgattgagccgtgccaatat 81
>48386_bol-miR171a:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatat 87
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 11 atattggtgcggttcaatc 29
>48367_bna-miR171e:pmrd
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 62 ttgtttgattgagccgtgccaatat 86
>48366_bna-miR171d:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
|||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatat 87
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 11 atattggtgcggttcaatc 29
>54452_sbi-miR171a:pmrd
Length = 161
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 tgtttgattgagccgtgccaatat 76
||||||||||||||||||||||||
Sbjct: 118 tgtttgattgagccgtgccaatat 141
>54551_sly-miR171a:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtttgattgagccgtgccaatat 76
|||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatat 106
>48723_mtr-miR171g:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtttgattgagccgtgccaatat 76
|||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatat 99
>48722_mtr-miR171d:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtttgattgagccgtgccaatat 76
|||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatat 99
>46978_ath-miR171b:pmrd
Length = 117
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 tgttgtttgattgagccgtgccaatat 76
||||||| |||||||||||||||||||
Sbjct: 68 tgttgttcgattgagccgtgccaatat 94
>55029_zma-miR171b:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatat 81
>54830_vvi-miR171c:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatat 89
>54462_sbi-miR171k:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatat 81
>51692_ptc-miR171i:pmrd
Length = 129
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatat 119
>51346_ppe-miR171:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatat 86
>51345_ppe-miR170:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatat 86
>48897_osa-miR171c:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatat 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 12 atattggtgcggttcaatc 30
>48896_osa-miR171b:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatat 89
>48312_bdi-miR171c:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatat 83
>46979_ath-miR171c:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatat 106
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atattggtgcggttcaatc 19
|||||||||||||||||||
Sbjct: 30 atattggtgcggttcaatc 48
>46879_aqc-miR171d:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 tttgattgagccgtgccaatat 76
||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatat 103
>55039_zma-miR171m:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 ttgattgagccgtgccaatat 76
|||||||||||||||||||||
Sbjct: 92 ttgattgagccgtgccaatat 112
>55036_zma-miR171i:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 ttgattgagccgtgccaatat 76
|||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatat 84
>55033_zma-miR171f:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 ttgattgagccgtgccaatat 76
|||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatat 134
>55024_zma-miR170m:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 ttgattgagccgtgccaatat 76
|||||||||||||||||||||
Sbjct: 94 ttgattgagccgtgccaatat 114
>48406_bra-miR171d:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatat 89
>48405_bra-miR171c:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatat 83
>48404_bra-miR171b:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatat 90
>48365_bna-miR171c:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatat 83
>48364_bna-miR171b:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatat 89
>48363_bna-miR171a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 ttgtttgattgagccgtgccaatat 76
||||| |||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatat 90
>46881_aqc-miR171f:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 44 gagctatgttgtttgattgagccgtgccaatat 76
||||| |||| ||| ||||||||||||||||||
Sbjct: 49 gagctttgttatttaattgagccgtgccaatat 81
>46878_aqc-miR171c:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 44 gagctatgttgtttgattgagccgtgccaatat 76
||||| |||| ||| ||||||||||||||||||
Sbjct: 34 gagctttgttatttaattgagccgtgccaatat 2
>55037_zma-miR171j:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatat 109
>55032_zma-miR171e:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatat 106
>55031_zma-miR171d:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatat 101
>54836_vvi-miR171i:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatat 88
>54828_vvi-miR171a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatat 87
>54680_tae-miR170b:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatat 93
>54460_sbi-miR171i:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatat 87
>54455_sbi-miR171d:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatat 134
>54453_sbi-miR171b:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatat 112
>52725_ptc-miRf10903-akr:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 60 tgattgagccgtgccaatat 79
>51691_ptc-miR171h:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatat 90
>51690_ptc-miR171g:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatat 90
>51689_ptc-miR171f:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatat 120
>51688_ptc-miR171e:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatat 84
>49676_osa-miRf10461-akr:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatat 114
>48905_osa-miR171n:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatat 98
>48904_osa-miR171m:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatat 106
>48900_osa-miR171f:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatat 116
>48899_osa-miR171e:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatat 108
>48898_osa-miR171d:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatat 124
>48894_osa-miR170b:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatat 106
>48893_osa-miR170a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatat 98
>48663_hvv-miR171:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatat 77
>48662_hvv-miR170:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatat 77
>46877_aqc-miR171b:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgtgccaatat 76
||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatat 74
