miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48133_ath-miRf11033-akr:pmrd
          Length = 121

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 64  aatgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||||
Sbjct: 83  aatgagaatcttgatgatgctgcat 107




>47531_ath-miRf10431-akr:pmrd
          Length = 126

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 64  aatgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||||
Sbjct: 87  aatgagaatcttgatgatgctgcat 111




>46983_ath-miR172a:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 64 aatgagaatcttgatgatgctgcat 88
          |||||||||||||||||||||||||
Sbjct: 74 aatgagaatcttgatgatgctgcat 98




>55043_zma-miR172d:pmrd
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 65 atgagaatcttgatgatgctgcat 88
          ||||||||||||||||||||||||
Sbjct: 51 atgagaatcttgatgatgctgcat 74




>55042_zma-miR172c:pmrd
          Length = 123

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 100 atgagaatcttgatgatgctgcat 123




>55041_zma-miR172b:pmrd
          Length = 126

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 103 atgagaatcttgatgatgctgcat 126




>55040_zma-miR172a:pmrd
          Length = 83

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 65 atgagaatcttgatgatgctgcat 88
          ||||||||||||||||||||||||
Sbjct: 60 atgagaatcttgatgatgctgcat 83




>54840_vvi-miR172d:pmrd
          Length = 109

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 65 atgagaatcttgatgatgctgcat 88
          ||||||||||||||||||||||||
Sbjct: 76 atgagaatcttgatgatgctgcat 99



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 69 gaatcttgatgatgctgcat 88
          ||||||||||||||||||||
Sbjct: 28 gaatcttgatgatgctgcat 9




>54837_vvi-miR172a:pmrd
          Length = 110

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 65 atgagaatcttgatgatgctgcat 88
          ||||||||||||||||||||||||
Sbjct: 32 atgagaatcttgatgatgctgcat 9




>54668_stu-miR172:pmrd
          Length = 93

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 65 atgagaatcttgatgatgctgcat 88
          ||||||||||||||||||||||||
Sbjct: 70 atgagaatcttgatgatgctgcat 93




>54466_sbi-miR172d:pmrd
          Length = 111

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 65 atgagaatcttgatgatgctgcat 88
          ||||||||||||||||||||||||
Sbjct: 70 atgagaatcttgatgatgctgcat 93




>54465_sbi-miR172c:pmrd
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 96  atgagaatcttgatgatgctgcat 119




>54463_sbi-miR172a:pmrd
          Length = 102

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 79  atgagaatcttgatgatgctgcat 102




>49516_osa-miRf10301-akr:pmrd
          Length = 123

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 84  atgagaatcttgatgatgctgcat 107




>48909_osa-miR172d:pmrd
          Length = 130

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 88  atgagaatcttgatgatgctgcat 111




>48693_mes-miR172:pmrd
          Length = 146

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 113 atgagaatcttgatgatgctgcat 136




>48410_bra-miR172b:pmrd
          Length = 107

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 79  atgagaatcttgatgatgctgcat 102




>48409_bra-miR172b:pmrd
          Length = 107

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 79  atgagaatcttgatgatgctgcat 102




>48408_bra-miR172a:pmrd
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 84  atgagaatcttgatgatgctgcat 107




>48388_bol-miR172b:pmrd
          Length = 107

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 79  atgagaatcttgatgatgctgcat 102




>48387_bol-miR172a:pmrd
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 84  atgagaatcttgatgatgctgcat 107




>47664_ath-miRf10564-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 65 atgagaatcttgatgatgctgcat 88
          ||||||||||||||||||||||||
Sbjct: 72 atgagaatcttgatgatgctgcat 95




>46985_ath-miR172b:pmrd
          Length = 95

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 65 atgagaatcttgatgatgctgcat 88
          ||||||||||||||||||||||||
Sbjct: 68 atgagaatcttgatgatgctgcat 91




>46984_ath-miR172b:pmrd
          Length = 95

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 65 atgagaatcttgatgatgctgcat 88
          ||||||||||||||||||||||||
Sbjct: 68 atgagaatcttgatgatgctgcat 91




>46882_aqc-miR172a:pmrd
          Length = 135

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 65  atgagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||||
Sbjct: 95  atgagaatcttgatgatgctgcat 118




>54838_vvi-miR172b:pmrd
          Length = 118

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 66 tgagaatcttgatgatgctgcat 88
          |||||||||||||||||||||||
Sbjct: 31 tgagaatcttgatgatgctgcat 9




>54556_sly-miR172b:pmrd
          Length = 135

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgcat 135




>52946_ptc-miRf11124-akr:pmrd
          Length = 138

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 102 tgagaatcttgatgatgctgcat 124



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 64 aatgagaatcttgatgatgctgca 87
          |||| |||||||||||||||||||
Sbjct: 39 aatgtgaatcttgatgatgctgca 16




>52845_ptc-miRf11023-akr:pmrd
          Length = 133

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 105 tgagaatcttgatgatgctgcat 127




>51947_ptc-miRf10125-akr:pmrd
          Length = 136

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 101 tgagaatcttgatgatgctgcat 123



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 64 aatgagaatcttgatgatgctgca 87
          |||| |||||||||||||||||||
Sbjct: 38 aatgtgaatcttgatgatgctgca 15




>51903_ptc-miRf10081-akr:pmrd
          Length = 147

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 112 tgagaatcttgatgatgctgcat 134




>51703_ptc-miR172f:pmrd
          Length = 161

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 130 tgagaatcttgatgatgctgcat 152




>51700_ptc-miR172c:pmrd
          Length = 128

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 97  tgagaatcttgatgatgctgcat 119



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 64 aatgagaatcttgatgatgctgca 87
          |||| |||||||||||||||||||
Sbjct: 35 aatgtgaatcttgatgatgctgca 12




>51699_ptc-miR172b:pmrd
          Length = 140

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 109 tgagaatcttgatgatgctgcat 131




>51698_ptc-miR172a:pmrd
          Length = 129

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 98  tgagaatcttgatgatgctgcat 120



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 64 aatgagaatcttgatgatgctgca 87
          |||| |||||||||||||||||||
Sbjct: 35 aatgtgaatcttgatgatgctgca 12




>51344_ppd-miR172b:pmrd
          Length = 139

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 66 tgagaatcttgatgatgctgcat 88
          |||||||||||||||||||||||
Sbjct: 31 tgagaatcttgatgatgctgcat 9




>51343_ppd-miR172a:pmrd
          Length = 139

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 107 tgagaatcttgatgatgctgcat 129




>48906_osa-miR172a:pmrd
          Length = 109

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 66 tgagaatcttgatgatgctgcat 88
          |||||||||||||||||||||||
Sbjct: 77 tgagaatcttgatgatgctgcat 99




>48571_gma-miR172b:pmrd
          Length = 153

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 112 tgagaatcttgatgatgctgcat 134




>48570_gma-miR172a:pmrd
          Length = 159

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 66  tgagaatcttgatgatgctgcat 88
           |||||||||||||||||||||||
Sbjct: 118 tgagaatcttgatgatgctgcat 140




>48151_ath-miRf11051-akr:pmrd
          Length = 133

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 65  atgagaatcttgatgatgctgca 87
           |||||||||||||||||||||||
Sbjct: 95  atgagaatcttgatgatgctgca 117




>47855_ath-miRf10755-akr:pmrd
          Length = 133

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 65 atgagaatcttgatgatgctgca 87
          |||||||||||||||||||||||
Sbjct: 39 atgagaatcttgatgatgctgca 17




>47545_ath-miRf10445-akr:pmrd
          Length = 131

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 65  atgagaatcttgatgatgctgca 87
           |||||||||||||||||||||||
Sbjct: 94  atgagaatcttgatgatgctgca 116




>46986_ath-miR172c:pmrd
          Length = 133

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 65  atgagaatcttgatgatgctgca 87
           |||||||||||||||||||||||
Sbjct: 95  atgagaatcttgatgatgctgca 117




>54555_sly-miR172a:pmrd
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 67  gagaatcttgatgatgctgcat 88
           ||||||||||||||||||||||
Sbjct: 85  gagaatcttgatgatgctgcat 106




>46987_ath-miR172d:pmrd
          Length = 124

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 66  tgagaatcttgatgatgctgca 87
           ||||||||||||||||||||||
Sbjct: 86  tgagaatcttgatgatgctgca 107




>48637_gra-miR172a:pmrd
          Length = 148

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 68 agaatcttgatgatgctgcat 88
          |||||||||||||||||||||
Sbjct: 1  agaatcttgatgatgctgcat 21




>55045_zma-miR172f:pmrd
          Length = 135

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 116 gaatcttgatgatgctgcat 135




>55044_zma-miR172e:pmrd
          Length = 174

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 136 gaatcttgatgatgctgcat 155




>54464_sbi-miR172b:pmrd
          Length = 170

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 151 gaatcttgatgatgctgcat 170




>53739_ptc-miRf11917-akr:pmrd
          Length = 143

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 109 gaatcttgatgatgctgcat 128




>52835_ptc-miRf11013-akr:pmrd
          Length = 136

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 69 gaatcttgatgatgctgcat 88
          ||||||||||||||||||||
Sbjct: 31 gaatcttgatgatgctgcat 12




>52315_ptc-miRf10493-akr:pmrd
          Length = 141

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 108 gaatcttgatgatgctgcat 127




>51901_ptc-miRf10079-akr:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 69 gaatcttgatgatgctgcat 88
          ||||||||||||||||||||
Sbjct: 29 gaatcttgatgatgctgcat 10




>51702_ptc-miR172e:pmrd
          Length = 133

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 105 gaatcttgatgatgctgcat 124




>51701_ptc-miR172d:pmrd
          Length = 182

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 154 gaatcttgatgatgctgcat 173




>48907_osa-miR172b:pmrd
          Length = 238

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 209 gaatcttgatgatgctgcat 228




>47734_ath-miRf10634-akr:pmrd
          Length = 138

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 69 gaatcttgatgatgctgcat 88
          ||||||||||||||||||||
Sbjct: 37 gaatcttgatgatgctgcat 18




>46988_ath-miR172e:pmrd
          Length = 125

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 96  gaatcttgatgatgctgcat 115




>46883_aqc-miR172b:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaatcttgatgatgctgcat 88
           ||||||||||||||||||||
Sbjct: 87  gaatcttgatgatgctgcat 106