miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 77.8 bits (39), Expect = 2e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
||||||||||||||||||||||||| | |||| ||| ||| ||||||||||||||||||
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 ttccaca 67
| |||||
Sbjct: 72 tcccaca 78
Score = 50.1 bits (25), Expect = 5e-07
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 106 ggcttgcatacctcaggagctgcattacctga-gttgcatcatgttttggattgaaggga 164
|||||||||| |||||||||| ||||||| | ||| ||| | ||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaaggga 172
Query: 165 gctct 169
|||||
Sbjct: 173 gctct 177
>54777_vvi-miR159c:pmrd
Length = 190
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcatta 132
||||||||||||||||||||| ||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatatctcaggagctgcatta 141
Score = 56.0 bits (28), Expect = 9e-09
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctga 52
||||||||||||||||||||||| | | || || ||| ||||||||||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctga 61
>54378_pvu-miR159:pmrd
Length = 174
Score = 65.9 bits (33), Expect = 9e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
|||||||||||||||||||| || ||| || || ||| |||||||||||| ||||||| |
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 ttccacacttcta 73
| ||||| |||||
Sbjct: 63 tcccacagttcta 75
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 65.9 bits (33), Expect = 9e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
|||||||||||||||||||| || ||| || || ||| |||||||||||| ||||||| |
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 ttccacacttcta 73
| ||||| |||||
Sbjct: 63 tcccacagttcta 75
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 60.0 bits (30), Expect = 6e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 58
||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 7 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 64
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 ttttggattgaagggagctct 169
|||||||||||||||||||||
Sbjct: 148 ttttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 60.0 bits (30), Expect = 6e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 58
||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 ttttggattgaagggagctct 169
|||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctct 173
>51602_ptc-miR159a:pmrd
Length = 183
Score = 60.0 bits (30), Expect = 6e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 58
||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 149 ttttggattgaagggagctct 169
|||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctct 173
>48539_gma-miR159a:pmrd
Length = 214
Score = 58.0 bits (29), Expect = 2e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaa 60
|||||||||||||||||||| || ||| || || ||| ||||||||||| ||||||| |
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 ttccacacttcta 73
| ||||| |||||
Sbjct: 82 tcccacagttcta 94
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctct 194
>54674_tae-miR159b:pmrd
Length = 255
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcat 130
||||||||| |||||||||| || ||||||||||||
Sbjct: 175 gataggcttatggcttgcatgccccaggagctgcat 210
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>48825_osa-miR159m:pmrd
Length = 249
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcat 130
||||||||| |||||||||| || ||||||||||||
Sbjct: 174 gataggcttatggcttgcatgccccaggagctgcat 209
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctct 248
>48819_osa-miR159a:pmrd
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcat 130
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcatacctcaggagctgcat 130
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>54540_sly-miR159:pmrd
Length = 177
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 143 atcatgttttggattgaagggagctct 169
||||| |||||||||||||||||||||
Sbjct: 150 atcattttttggattgaagggagctct 176
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54931_zma-miR159b:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctct 201
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54673_tae-miR159a:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 gataggcttgtggcttgcat 114
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctct 225
>48820_osa-miR159b:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>48701_mtr-miR159c:pmrd
Length = 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48699_mtr-miR159a:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctct 167
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48657_hvv-miR159b:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48656_hvv-miR159a:pmrd
Length = 303
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180
>46932_ath-miR159b:pmrd
Length = 196
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctct 169
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
