miRNEST 2.0, an integrative microRNA resource :: BLAST
>51602_ptc-miR159a:pmrd
Length = 183
Score = 305 bits (154), Expect = 5e-84
Identities = 157/158 (99%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 74
Query: 63 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 122
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acagtcctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 134
Query: 123 gcctaatgttagatccctttttggattgaagggagctc 160
||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcctaatgttagatccctttttggattgaagggagctc 172
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 297 bits (150), Expect = 1e-81
Identities = 156/158 (98%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 69
Query: 63 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 122
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acagtcctatctatcaaccgaaggataggtttgcggcttgcatatctcaggagctttatt 129
Query: 123 gcctaatgttagatccctttttggattgaagggagctc 160
||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gcctaatgttagatccctttttggattgaagggagctc 167
>51604_ptc-miR159c:pmrd
Length = 183
Score = 297 bits (150), Expect = 1e-81
Identities = 156/158 (98%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 74
Query: 63 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 122
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acagtcctatctatcaaccgaaggataggtttgcggcttgcatatctcaggagctttatt 134
Query: 123 gcctaatgttagatccctttttggattgaagggagctc 160
||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcctaatgttagatccctttttggattgaagggagctc 172
>51603_ptc-miR159b:pmrd
Length = 187
Score = 109 bits (55), Expect = 6e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 94 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 153
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaag 169
Query: 154 ggagctc 160
|||||||
Sbjct: 170 ggagctc 176
>54777_vvi-miR159c:pmrd
Length = 190
Score = 79.8 bits (40), Expect = 6e-16
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat-c 61
|||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||| |
Sbjct: 13 gctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggatcc 72
Query: 62 cacagccctatc 73
||||||||||||
Sbjct: 73 cacagccctatc 84
>54378_pvu-miR159:pmrd
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||||||||||
Sbjct: 6 gctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggatcc 65
>54377_pvu-miR159:pmrd
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||||||||||
Sbjct: 6 gctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggatcc 65
>48539_gma-miR159a:pmrd
Length = 214
Score = 63.9 bits (32), Expect = 3e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 3 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 62
||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||||||
Sbjct: 25 gctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggatcc 84
>54540_sly-miR159:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/77 (83%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 86 gataggtttgcggcttgcatatctcaggagcttta--ttgcctaatgttagatccctttt 143
||||||||| || |||||||| |||||||||||| || || |||| |||| ||||
Sbjct: 99 gataggttttgggtttgcatatgtcaggagctttattttaccctttgtttgatcattttt 158
Query: 144 tggattgaagggagctc 160
|||||||||||||||||
Sbjct: 159 tggattgaagggagctc 175
>46932_ath-miR159b:pmrd
Length = 196
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 aagctgctaagctatggatcc 62
|||||||||||||||||||||
Sbjct: 47 aagctgctaagctatggatcc 67
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 42 aagctgctaagctatggatcc 62
|||||||||||||||||||||
Sbjct: 46 aagctgctaagctatggatcc 66
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 ttgcatatctcaggagcttta 120
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
>54674_tae-miR159b:pmrd
Length = 255
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 137 ccctttttggattgaagggagctc 160
|||| |||||||||||||||||||
Sbjct: 225 ccctctttggattgaagggagctc 248
>48825_osa-miR159m:pmrd
Length = 249
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 137 ccctttttggattgaagggagctc 160
|||| |||||||||||||||||||
Sbjct: 224 ccctctttggattgaagggagctc 247
>48819_osa-miR159a:pmrd
Length = 272
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 137 ccctttttggattgaagggagctc 160
|||| |||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctc 260
>48796_oru-miR159:pmrd
Length = 274
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 137 ccctttttggattgaagggagctc 160
|||| |||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctc 260
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 97 ggcttgcatatctcaggagcttta 120
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 97 ggcttgcatatctcaggagcttta 120
||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132
