miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48529_gma-miR156b:pmrd
          Length = 120

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactgttggga 60
           |||||||||| |||||||||||||||  | |||| ||||   |||| |||  ||||||||
Sbjct: 21  tgacagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttgttggga 80

                                  
Query: 61  gtgtgctctctcttcttctgtca 83
           |||||| |||||||| |||||||
Sbjct: 81  gtgtgccctctcttcctctgtca 103




>54766_vvi-miR156a:pmrd
          Length = 104

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 55 ttgggagtgtgctctctcttcttctgtca 83
          |||||||||||||||||||||||||||||
Sbjct: 64 ttgggagtgtgctctctcttcttctgtca 92




>48676_lja-miR157b:pmrd
          Length = 86

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 71/84 (84%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgacagaagaaagagagcacaacccgccattggccaaagaga-tcttcgccactgttggg 59
          |||||||||| ||||||||||||||   | |||  ||||||| |||| ||   |||||||
Sbjct: 2  tgacagaagagagagagcacaacccaggaatggtgaaagagagtctttgcttttgttggg 61

                                  
Query: 60 agtgtgctctctcttcttctgtca 83
          ||||||||||| ||||||||||||
Sbjct: 62 agtgtgctctcccttcttctgtca 85




>46917_ath-miR156h:pmrd
          Length = 106

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tgacagaagaaagagagcacaacc 24
          ||||||||||||||||||||||||
Sbjct: 12 tgacagaagaaagagagcacaacc 35




>46857_ahy-miR157k:pmrd
          Length = 139

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 53  tgttgggagtgtgctctctcttcttctgtca 83
           |||||||||||||||||||  ||||||||||
Sbjct: 75  tgttgggagtgtgctctctactcttctgtca 105



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  tgacagaagaaagagagcacaacccg 26
          |||||||||| |||||||||||||||
Sbjct: 22 tgacagaagagagagagcacaacccg 47




>48811_osa-miR156k:pmrd
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  tgacagaagaaagagagcacaacccg 26
          |||||||||| |||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36




>54920_zma-miR156j:pmrd
          Length = 125

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  tgacagaagaaagagagcacaaccc 25
          |||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45




>54571_smo-miR156c:pmrd
          Length = 100

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tgacagaagaaagagagcaca 21
          |||||||||||||||||||||
Sbjct: 12 tgacagaagaaagagagcaca 32




>54396_sbi-miR156d:pmrd
          Length = 125

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  tgacagaagaaagagagcacaaccc 25
          |||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45




>46903_aqc-miR529:pmrd
          Length = 125

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  tgacagaagaaagagagcacaaccc 25
          |||||||||| ||||||||||||||
Sbjct: 18 tgacagaagagagagagcacaaccc 42




>51552_pta-miR156b:pmrd
          Length = 83

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgacagaagaaagagagcacaacc 24
          |||||||||| |||||||||||||
Sbjct: 3  tgacagaagatagagagcacaacc 26




>48675_lja-miR157a:pmrd
          Length = 58

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgacagaagaaagagagcacaacc 24
          |||||||||| |||||||||||||
Sbjct: 2  tgacagaagatagagagcacaacc 25




>48530_gma-miR156c:pmrd
          Length = 185

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   tgacagaagaaagagagcacaacc 24
           |||||||||| |||||||||||||
Sbjct: 147 tgacagaagatagagagcacaacc 170




>54771_vvi-miR156f:pmrd
          Length = 105

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgacagaagaaagagagcacaac 23
          |||||||||| ||||||||||||
Sbjct: 12 tgacagaagatagagagcacaac 34




>54624_sof-miR156f:pmrd
          Length = 46

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgacagaagaaagagagcacaac 23
          |||||||||| ||||||||||||
Sbjct: 1  tgacagaagagagagagcacaac 23