miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54367_ptr-miR169a:pmrd
Length = 101
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgacgactcgcttttgcttttgcttccatcaatataggcataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgacgactcgcttttgcttttgcttccatcaatataggcataa 61
Query: 61 tcaagaagagatgaatccgttggcaggttgttcttggct 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tcaagaagagatgaatccgttggcaggttgttcttggct 100
>52003_ptc-miRf10181-akr:pmrd
Length = 113
Score = 127 bits (64), Expect = 2e-30
Identities = 90/99 (90%), Gaps = 6/99 (6%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgacgactcgcttttgcttttgcttccatcaatataggcataa 60
||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||
Sbjct: 11 agccaaggatgacttgccgacgactcgtttttgcttt------catcaatatacgcataa 64
Query: 61 tcaagaagagatgaatccgttggcaggttgttcttggct 99
| |||||||||||||||||||||||||||||||||||||
Sbjct: 65 ttaagaagagatgaatccgttggcaggttgttcttggct 103
>51659_ptc-miR169b:pmrd
Length = 113
Score = 127 bits (64), Expect = 2e-30
Identities = 90/99 (90%), Gaps = 6/99 (6%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgacgactcgcttttgcttttgcttccatcaatataggcataa 60
||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||
Sbjct: 12 agccaaggatgacttgccgacgactcgtttttgcttt------catcaatatacgcataa 65
Query: 61 tcaagaagagatgaatccgttggcaggttgttcttggct 99
| |||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttaagaagagatgaatccgttggcaggttgttcttggct 104
>51660_ptc-miR169c:pmrd
Length = 102
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgacgactc 26
||||||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgacgactc 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 64 agaagagatgaatccgttggcaggttgttcttggct 99
||||||||||||| ||||||||||| | |||||||
Sbjct: 58 agaagagatgaataggttggcaggttttccttggct 93
>46859_ama-miR169:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgacga 23
|||||||||||||||||||||||
Sbjct: 15 agccaaggatgacttgccgacga 37
>54368_ptr-miR169b:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgacgactc 26
|||||||||||| |||||||||||||
Sbjct: 2 agccaaggatgatttgccgacgactc 27
>55021_zma-miR169s:pmrd
Length = 150
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgac 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgac 22
>54809_vvi-miR169g:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgac 21
|||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgac 34
>51652_ptc-miR169a:pmrd
Length = 165
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgac 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgac 32
>48719_mtr-miR169c:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgccgac 21
|||||||||||||||||||||
Sbjct: 81 agccaaggatgacttgccgac 61
>48718_mtr-miR169b:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgac 21
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgac 42
>48717_mtr-miR169a:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgac 21
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgac 42
>48563_gma-miR169c:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgac 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgac 32
>48309_bdi-miR169a:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgac 21
|||||||||||||||||||||
Sbjct: 17 agccaaggatgacttgccgac 37
>55023_zma-miR169u:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccga 21
>55022_zma-miR169t:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccga 21
>55004_zma-miR169b:pmrd
Length = 156
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>55003_zma-miR169a:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>54808_vvi-miR169f:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccga 33
>54549_sly-miR169c:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 42 agccaaggatgacttgccga 61
>54437_sbi-miR169a:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccga 21
>48876_osa-miR169a:pmrd
Length = 173
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 39 agccaaggatgacttgccga 58
>48562_gma-miR169b:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>48351_bna-miR169b:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccga 38
>48350_bna-miR169a:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 20 agccaaggatgacttgccga 39
>46964_ath-miR169e:pmrd
Length = 217
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 71 agccaaggatgacttgccga 90
>46963_ath-miR169d:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccga 62
>46960_ath-miR169a:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccga 38
