miRNEST 2.0, an integrative microRNA resource :: BLAST
>48395_bra-miR159a:pmrd
Length = 185
Score = 333 bits (168), Expect = 3e-92
Identities = 174/176 (98%)
Strand = Plus / Plus
Query: 1 gggctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6 gggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaa 65
Query: 61 tcccataagccctaatccttatttataaaaaggatttggttatatggcttacatatctca 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 66 tcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctca 125
Query: 121 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 181
>48339_bna-miR159:pmrd
Length = 183
Score = 333 bits (168), Expect = 3e-92
Identities = 174/176 (98%)
Strand = Plus / Plus
Query: 1 gggctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4 gggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaa 63
Query: 61 tcccataagccctaatccttatttataaaaaggatttggttatatggcttacatatctca 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 64 tcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctca 123
Query: 121 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 179
>46931_ath-miR159a:pmrd
Length = 184
Score = 232 bits (117), Expect = 7e-62
Identities = 162/176 (92%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaatc 62
|||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatggatc 65
Query: 63 ccataagccctaatccttattta--taaaaaggatttggttatatggcttacatatctca 120
|||||||||||||||||| | | ||||||||||||||||||||| || |||||||||
Sbjct: 66 ccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcatatctca 125
Query: 121 ggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 176
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 181
>46932_ath-miR159b:pmrd
Length = 196
Score = 67.9 bits (34), Expect = 2e-12
Identities = 60/66 (90%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 112 catatctcaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 170
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 171 gagctc 176
||||||
Sbjct: 181 gagctc 186
Score = 65.9 bits (33), Expect = 1e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 3 gctccttatagttcaaacgagagttcagcagggtaaagaaaagctgctaagctatgaatc 62
||||||| ||||||| ||| ||| |||||||| ||| ||||||||||||||||| |||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 63 ccataagcc 71
|||||||||
Sbjct: 67 ccataagcc 75
>54378_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>54377_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>48539_gma-miR159a:pmrd
Length = 214
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 cttctttggattgaagggagctc 176
|||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctc 193
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 ttctttggattgaagggagctc 176
||||||||||||||||||||||
Sbjct: 145 ttctttggattgaagggagctc 166
>54930_zma-miR159a:pmrd
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctc 225
>54674_tae-miR159b:pmrd
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctc 248
>54631_sof-miR159d:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54629_sof-miR159b:pmrd
Length = 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctc 245
>54628_sof-miR159a:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54392_sar-miR159:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctc 173
>51338_pgl-miR159:pmrd
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctc 224
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctc 247
>48820_osa-miR159b:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctc 176
>48819_osa-miR159a:pmrd
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>48796_oru-miR159:pmrd
Length = 274
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tctttggattgaagggagctc 176
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 106 ggcttacatatctcaggagcttta 129
||||| ||||||||||||||||||
Sbjct: 104 ggcttgcatatctcaggagcttta 127
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 106 ggcttacatatctcaggagcttta 129
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 106 ggcttacatatctcaggagcttta 129
||||| ||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 106 ggcttacatatctcaggagcttta 129
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
