miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 54.0 bits (27), Expect = 3e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 60
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Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 ccc 63
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Sbjct: 71 ccc 73
Score = 48.1 bits (24), Expect = 2e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 94 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 153
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Sbjct: 111 ttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttggattgaa 170
Query: 154 gggagctc 161
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Sbjct: 171 gggagctc 178
>54540_sly-miR159:pmrd
Length = 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 134 tgatccttttttggattgaagggagctc 161
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Sbjct: 148 tgatcattttttggattgaagggagctc 175
>54378_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatct 28
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Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 136 atccttttttggattgaagggagctc 161
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Sbjct: 146 atccttctttggattgaagggagctc 171
>54377_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatct 28
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Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 136 atccttttttggattgaagggagctc 161
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Sbjct: 146 atccttctttggattgaagggagctc 171
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagg 24
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Sbjct: 8 gagctccttgaagtccaatagagg 31
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 135 gatccttttttggattgaagggagctc 161
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Sbjct: 141 gatccctttttggattgaagggagctc 167
>51604_ptc-miR159c:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagg 24
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Sbjct: 13 gagctccttgaagtccaatagagg 36
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 135 gatccttttttggattgaagggagctc 161
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Sbjct: 146 gatccctttttggattgaagggagctc 172
>51602_ptc-miR159a:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagg 24
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Sbjct: 13 gagctccttgaagtccaatagagg 36
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 135 gatccttttttggattgaagggagctc 161
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Sbjct: 146 gatccctttttggattgaagggagctc 172
>48539_gma-miR159a:pmrd
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaggatct 28
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Sbjct: 23 gagctccttgaagtccaattgaggatct 50
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 138 ccttttttggattgaagggagctc 161
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>51603_ptc-miR159b:pmrd
Length = 187
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 135 gatccttttttggattgaagggagctc 161
|||| ||||||||||||||||||||||
Sbjct: 150 gatctttttttggattgaagggagctc 176
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaataga 22
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Sbjct: 13 gagctccttgaagtccaataga 34
