miRNEST 2.0, an integrative microRNA resource :: BLAST
>54394_sbi-miR156b:pmrd
Length = 84
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatgagtgccatgctgggagctgtgc 60
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 cagaagagagtgagcacacacggtggtttcttagcatgagtgccatgttgggagctgtgc 63
Query: 61 gtgctcactctctatctg 78
||||||||||||||||||
Sbjct: 64 gtgctcactctctatctg 81
>54922_zma-miR156m:pmrd
Length = 83
Score = 115 bits (58), Expect = 5e-27
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatgagtgccatgctgggagctgtgc 60
|||||||||||||||||||| ||||||| |||| |||||||| |||||| ||||||||||
Sbjct: 4 cagaagagagtgagcacacacggtggttccttaccatgagtgtcatgctaggagctgtgc 63
Query: 61 gtgctcactctctatctg 78
||||||||||||||||||
Sbjct: 64 gtgctcactctctatctg 81
>54912_zma-miR156b:pmrd
Length = 124
Score = 115 bits (58), Expect = 5e-27
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatgagtgccatgctgggagctgtgc 60
|||||||||||||||||||| |||||||||||| |||||||| |||||| ||||||||||
Sbjct: 24 cagaagagagtgagcacacacggtggtttcttaccatgagtgtcatgctaggagctgtgc 83
Query: 61 gtgctcactctctatctg 78
|||||||| |||||||||
Sbjct: 84 gtgctcaccctctatctg 101
>49442_osa-miRf10227-akr:pmrd
Length = 93
Score = 113 bits (57), Expect = 2e-26
Identities = 75/80 (93%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatg--agtgccatgctgggagctgt 58
|||||||||||||||||||| |||| |||||||||||| || |||||||||||||||||
Sbjct: 86 cagaagagagtgagcacacacggtgctttcttagcatgcaagagccatgctgggagctgt 27
Query: 59 gcgtgctcactctctatctg 78
||||||||||||||||||||
Sbjct: 26 gcgtgctcactctctatctg 7
>48802_osa-miR156b:pmrd
Length = 176
Score = 113 bits (57), Expect = 2e-26
Identities = 75/80 (93%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatg--agtgccatgctgggagctgt 58
|||||||||||||||||||| |||| |||||||||||| || |||||||||||||||||
Sbjct: 46 cagaagagagtgagcacacacggtgctttcttagcatgcaagagccatgctgggagctgt 105
Query: 59 gcgtgctcactctctatctg 78
||||||||||||||||||||
Sbjct: 106 gcgtgctcactctctatctg 125
>54768_vvi-miR156c:pmrd
Length = 104
Score = 67.9 bits (34), Expect = 1e-12
Identities = 69/78 (88%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatgagtgccatgctgggagctgtgc 60
|||||||||||||||||||||||| ||||| ||||| || ||||||| | |||| |||
Sbjct: 14 cagaagagagtgagcacacatggtctgttctt-gcatgggt-ccatgcttgaagctctgc 71
Query: 61 gtgctcactctctatctg 78
||||||||||||||||||
Sbjct: 72 gtgctcactctctatctg 89
>48248_ath-miRf11148-akr:pmrd
Length = 96
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 1 cagaagagagtgagcacacatggtggtttctt 32
||||||||||||||||||||||||||||||||
Sbjct: 93 cagaagagagtgagcacacatggtggtttctt 62
>46914_ath-miR156e:pmrd
Length = 107
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttctt 32
||||||||||||||||||||||||||||||||
Sbjct: 10 cagaagagagtgagcacacatggtggtttctt 41
>53789_ptc-miRf11967-akr:pmrd
Length = 87
Score = 60.0 bits (30), Expect = 2e-10
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatgagtgccatgctgggagctgtgc 60
|||||||||||||||||||| ||| |||||| |||||| ||||||| | | || |||
Sbjct: 6 cagaagagagtgagcacacagggtactttctt-gcatgacatccatgcttgaaactttgc 64
Query: 61 gtgctcactctctatctg 78
||||||||||||||||||
Sbjct: 65 gtgctcactctctatctg 82
>51592_ptc-miR156b:pmrd
Length = 101
Score = 60.0 bits (30), Expect = 2e-10
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatgagtgccatgctgggagctgtgc 60
|||||||||||||||||||| ||| |||||| |||||| ||||||| | | || |||
Sbjct: 14 cagaagagagtgagcacacagggtactttctt-gcatgacatccatgcttgaaactttgc 72
Query: 61 gtgctcactctctatctg 78
||||||||||||||||||
Sbjct: 73 gtgctcactctctatctg 90
>47357_ath-miRf10257-akr:pmrd
Length = 94
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgg 26
||||||||||||||||||||||||||
Sbjct: 6 cagaagagagtgagcacacatggtgg 31
>47356_ath-miRf10256-akr:pmrd
Length = 94
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgg 26
||||||||||||||||||||||||||
Sbjct: 6 cagaagagagtgagcacacatggtgg 31
>46915_ath-miR156f:pmrd
Length = 132
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgg 26
||||||||||||||||||||||||||
Sbjct: 24 cagaagagagtgagcacacatggtgg 49
>54924_zma-miR156o:pmrd
Length = 99
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacacatggtg 28
>54913_zma-miR156c:pmrd
Length = 139
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||||||||||||||||
Sbjct: 24 cagaagagagtgagcacacatggtg 48
>54395_sbi-miR156c:pmrd
Length = 95
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacacatggtg 28
>51354_ppr-miR156:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||||||||||||||||
Sbjct: 5 cagaagagagtgagcacacatggtg 29
>48803_osa-miR156c:pmrd
Length = 149
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||||||||||||||||
Sbjct: 32 cagaagagagtgagcacacatggtg 56
>48795_oru-miR156:pmrd
Length = 93
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||||||||||||||||
Sbjct: 5 cagaagagagtgagcacacatggtg 29
>46916_ath-miR156g:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatgg 23
|||||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacacatgg 36
>52469_ptc-miRf10647-akr:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 65/78 (83%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatgagtgccatgctgggagctgtgc 60
|||||||||||||||||||| ||| |||||| |||||| |||||| | |||| |||
Sbjct: 90 cagaagagagtgagcacacagggtactttctt-gcatgacgttcatgcttgaagctttgc 32
Query: 61 gtgctcactctctatctg 78
|||| ||| |||||||||
Sbjct: 31 gtgcccaccctctatctg 14
>51594_ptc-miR156d:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 65/78 (83%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttcttagcatgagtgccatgctgggagctgtgc 60
|||||||||||||||||||| ||| |||||| |||||| |||||| | |||| |||
Sbjct: 14 cagaagagagtgagcacacagggtactttctt-gcatgacgttcatgcttgaagctttgc 72
Query: 61 gtgctcactctctatctg 78
|||| ||| |||||||||
Sbjct: 73 gtgcccaccctctatctg 90
>49326_osa-miRf10111-akr:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttc 30
||||||||||||||||||| |||| |||||
Sbjct: 10 cagaagagagtgagcacacgtggttgtttc 39
>48801_osa-miR156a:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtggtttc 30
||||||||||||||||||| |||| |||||
Sbjct: 10 cagaagagagtgagcacacgtggttgtttc 39
>54927_zma-miR156r:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||| ||||||||||||
Sbjct: 4 cagaagagagtgggcacacatggtg 28
>51355_ppt-miR156a:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 3 gaagagagtgagcacacatgg 23
|||||||||||||||||||||
Sbjct: 91 gaagagagtgagcacacatgg 71
>54911_zma-miR156a:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 21 cagaagagagtgagcacaca 40
>54767_vvi-miR156b:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>54401_sbi-miR156i:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 6 cagaagagagtgagcacaca 25
>51926_ptc-miRf10104-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 11 cagaagagagtgagcacaca 30
>51596_ptc-miR156f:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>51595_ptc-miR156e:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>51593_ptc-miR156c:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>51591_ptc-miR156a:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>48807_osa-miR156g:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 7 cagaagagagtgagcacaca 26
>48806_osa-miR156f:pmrd
Length = 186
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 7 cagaagagagtgagcacaca 26
>48652_hvv-miR156a:pmrd
Length = 394
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacaca 23
>48490_ghr-miR156c:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 6 cagaagagagtgagcacaca 25
>48489_ghr-miR156b:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 6 cagaagagagtgagcacaca 25
Score = 38.2 bits (19), Expect = 9e-04
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 44 catgctgggagctgtgcgtgctcactctctatctg 78
|||||| | |||| ||||||||||| |||||||||
Sbjct: 54 catgcttgaagctctgcgtgctcaccctctatctg 88
>48488_ghr-miR156a:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 12 cagaagagagtgagcacaca 31
Score = 38.2 bits (19), Expect = 9e-04
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 44 catgctgggagctgtgcgtgctcactctctatctg 78
|||||| | |||| ||||||||||| |||||||||
Sbjct: 60 catgcttgaagctctgcgtgctcaccctctatctg 94
>48336_bna-miR156a:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacaca 23
>47667_ath-miRf10567-akr:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 9 cagaagagagtgagcacaca 28
>46913_ath-miR156d:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 21 cagaagagagtgagcacaca 40
>46912_ath-miR156c:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 15 cagaagagagtgagcacaca 34
>46910_ath-miR156a:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 24 cagaagagagtgagcacaca 43
>54923_zma-miR156n:pmrd
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacac 22
>54919_zma-miR156i:pmrd
Length = 117
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 16 cagaagagagtgagcacac 34
>54918_zma-miR156h:pmrd
Length = 115
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 23 cagaagagagtgagcacac 41
>54915_zma-miR156e:pmrd
Length = 126
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 23 cagaagagagtgagcacac 41
>54914_zma-miR156d:pmrd
Length = 119
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 19 cagaagagagtgagcacac 37
>54656_stu-miR156a:pmrd
Length = 86
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacac 22
>54569_smo-miR156a:pmrd
Length = 102
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacac 32
>54402_sbi-miR157:pmrd
Length = 86
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 5 cagaagagagtgagcacac 23
>54400_sbi-miR156h:pmrd
Length = 94
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 5 cagaagagagtgagcacac 23
>54399_sbi-miR156g:pmrd
Length = 89
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 5 cagaagagagtgagcacac 23
>54393_sbi-miR156a:pmrd
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacac 22
>48813_osa-miR156m:pmrd
Length = 86
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacac 22
>48810_osa-miR156j:pmrd
Length = 165
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 45 cagaagagagtgagcacac 63
>48809_osa-miR156i:pmrd
Length = 90
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 6 cagaagagagtgagcacac 24
>48808_osa-miR156h:pmrd
Length = 101
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 12 cagaagagagtgagcacac 30
>48805_osa-miR156e:pmrd
Length = 104
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 13 cagaagagagtgagcacac 31
>48804_osa-miR156d:pmrd
Length = 129
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 23 cagaagagagtgagcacac 41
>48491_ghr-miR156d:pmrd
Length = 96
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 12 cagaagagagtgagcacac 30
>48425_cpt-miR156a:pmrd
Length = 101
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacac 19
|||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacac 32
