miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49859_osa-miRf10644-akr:pmrd
Length = 107
Score = 168 bits (85), Expect = 1e-42
Identities = 100/105 (95%)
Strand = Plus / Minus
Query: 15 tttggcacagctccagctccagctccacccctcctggagctggagctcagccaaacagtt 74
||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| ||
Sbjct: 107 tttggcacagctccagctccaactccacccctccttgagctggagctcagacaaacaatt 48
Query: 75 tcagctccaccaaaactgggagtggagttgggtggagctctctca 119
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 47 tcagctccaccaaaactaggagtggagttgggtggagctctctca 3
>49710_osa-miRf10495-akr:pmrd
Length = 103
Score = 167 bits (84), Expect = 5e-42
Identities = 96/100 (96%)
Strand = Plus / Plus
Query: 20 cacagctccagctccagctccacccctcctggagctggagctcagccaaacagtttcagc 79
|||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 4 cacagctctagctccagcttcacccctcttggagctggagctcagccaaacagtttcagc 63
Query: 80 tccaccaaaactgggagtggagttgggtggagctctctca 119
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 64 tccactaaaactgggagtggagttgggtggagctctctca 103
>49544_osa-miRf10329-akr:pmrd
Length = 103
Score = 167 bits (84), Expect = 5e-42
Identities = 96/100 (96%)
Strand = Plus / Plus
Query: 20 cacagctccagctccagctccacccctcctggagctggagctcagccaaacagtttcagc 79
|||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4 cacagctccaactctagctccacccctcctggagctggagctcagctaaacagtttcagc 63
Query: 80 tccaccaaaactgggagtggagttgggtggagctctctca 119
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 64 tccaccaaaactgggagtggagctgggtggagctctctca 103
>50218_osa-miRf11003-akr:pmrd
Length = 84
Score = 141 bits (71), Expect = 3e-34
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 8 gggcctgtttggcacagctccagctccagctccacccctcctggagctggagctcagcca 67
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gggcctgtttggcacagctctagctccagctccacccctcctggagctggagctcagcca 69
Query: 68 aacagtttcagctcc 82
|||||||||||||||
Sbjct: 70 aacagtttcagctcc 84
>49974_osa-miRf10759-akr:pmrd
Length = 83
Score = 141 bits (71), Expect = 3e-34
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 4 ctaagggcctgtttggcacagctccagctccagctccacccctcctggagctggagctca 63
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 5 ctaagggcctgtttggcacagctctagctccaactccacccctcctggagctggagctca 64
Query: 64 gccaaacagtttcagctcc 82
|||||||||||||||||||
Sbjct: 65 gccaaacagtttcagctcc 83
>49247_osa-miRf10032-akr:pmrd
Length = 78
Score = 137 bits (69), Expect = 4e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 9 ggcctgtttggcacagctccagctccagctccacccctcctggagctggagctcagccaa 68
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6 ggcctgtttggcacagctccagctccagctccacccctcctggagctggagctcagtcaa 65
Query: 69 acagtttcagctc 81
|||||||||||||
Sbjct: 66 acagtttcagctc 78
>50649_osa-miRf11434-akr:pmrd
Length = 82
Score = 127 bits (64), Expect = 4e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 10 gcctgtttggcacagctccagctccagctccacccctcctggagctggagctcagccaaa 69
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 11 gcctgtttggcacagctccagctccaactccacccctcctggagctggagctcagccaaa 70
Query: 70 cagtttcagctc 81
|| |||||||||
Sbjct: 71 caatttcagctc 82
>49291_osa-miRf10076-akr:pmrd
Length = 104
Score = 121 bits (61), Expect = 3e-28
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 159 ccacaactccactccagactcaactcctggagttatatttaggagttggagctgtaccaa 218
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 ccacaactctactccagactcaactcctggagttatatttaggagttggagctgtatcaa 60
Query: 219 acaggccct 227
|||||||||
Sbjct: 61 acaggccct 69
>49426_osa-miRf10211-akr:pmrd
Length = 78
Score = 107 bits (54), Expect = 4e-24
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 12 ctgtttggcacagctccagctccagctccacccctcctggagctggagctcagccaaaca 71
|||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||
Sbjct: 10 ctgtttggcacagctccagctccagctccacctcttctggagctggagttcagccaaaca 69
Query: 72 gtttca 77
||||||
Sbjct: 70 gtttca 75
>50725_osa-miRf11510-akr:pmrd
Length = 81
Score = 101 bits (51), Expect = 2e-22
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 10 gcctgtttggcacagctccagctccagctccacccctcctggagctggagctcagccaaa 69
|||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 9 gcctgtttggcacagctctagctctagctccacccctcttggagctggagctcagccaaa 68
Query: 70 cag 72
|||
Sbjct: 69 cag 71
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 5 taagggcctgtttggcacagctccagctcca 35
|||||||||||||||| |||||||||||||
Sbjct: 78 taagggcctgtttggctgagctccagctcca 48
>50724_osa-miRf11509-akr:pmrd
Length = 83
Score = 101 bits (51), Expect = 2e-22
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 10 gcctgtttggcacagctccagctccagctccacccctcctggagctggagctcagccaaa 69
|||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 10 gcctgtttggcacagctctagctctagctccacccctcttggagctggagctcagccaaa 69
Query: 70 cag 72
|||
Sbjct: 70 cag 72
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 5 taagggcctgtttggcacagctccagctcca 35
|||||||||||||||| |||||||||||||
Sbjct: 79 taagggcctgtttggctgagctccagctcca 49
>50723_osa-miRf11508-akr:pmrd
Length = 90
Score = 101 bits (51), Expect = 2e-22
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 10 gcctgtttggcacagctccagctccagctccacccctcctggagctggagctcagccaaa 69
|||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 13 gcctgtttggcacagctctagctctagctccacccctcttggagctggagctcagccaaa 72
Query: 70 cag 72
|||
Sbjct: 73 cag 75
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 5 taagggcctgtttggcacagctccagctcca 35
|||||||||||||||| |||||||||||||
Sbjct: 82 taagggcctgtttggctgagctccagctcca 52
>50483_osa-miRf11268-akr:pmrd
Length = 73
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 12 ctgtttggcacagctccagctccagctccacccctcctggagctggagctcagccaaaca 71
|||||||||||||||||||||| ||||||| | || ||||||||||||||||||||||||
Sbjct: 7 ctgtttggcacagctccagctctagctccatctcttctggagctggagctcagccaaaca 66
Query: 72 gtttcag 78
|||||||
Sbjct: 67 gtttcag 73
>51155_osa-miRf11940-akr:pmrd
Length = 69
Score = 93.7 bits (47), Expect = 6e-20
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 14 gtttggcacagctccagctccagctccacccctcctggagctggagctcagccaaacagt 73
|||||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||
Sbjct: 63 gtttggcacagctccagctccaactccacctctcgtggagctagagctcagccaaacagt 4
Query: 74 ttc 76
|||
Sbjct: 3 ttc 1
>50337_osa-miRf11122-akr:pmrd
Length = 114
Score = 93.7 bits (47), Expect = 6e-20
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 147 gtttaggcagctccacaactccactccagactcaactcctggagttatatttaggagttg 206
|||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||
Sbjct: 114 gtttgggcagctccacaactctactccagacctaactcctggagttaaatttaggagctg 55
Query: 207 gagctgtaccaaacaggccctaa 229
|||| |||||||| ||||||||
Sbjct: 54 cagctctaccaaacgggccctaa 32
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 147 gtttaggcagctccacaactccactccagact 178
||||||||||||||||||||||||||||||||
Sbjct: 1 gtttaggcagctccacaactccactccagact 32
>50729_osa-miRf11514-akr:pmrd
Length = 77
Score = 91.7 bits (46), Expect = 2e-19
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 10 gcctgtttggcacagctccagctccagctccacccctcctggagctggagctcagccaaa 69
|||||||||||||||||||| || ||| |||||| ||||| ||||||||||||||||||
Sbjct: 70 gcctgtttggcacagctccaacttcagttccacctctcctcaagctggagctcagccaaa 11
Query: 70 cagtttcagc 79
||||||||||
Sbjct: 10 cagtttcagc 1
>49383_osa-miRf10168-akr:pmrd
Length = 75
Score = 65.9 bits (33), Expect = 1e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 8 gggcctgtttggcacagctccagctccagctccacccctcctggagctggagctcagcca 67
|||||||||||||||||||| ||||| | |||| | | ||||||||||||||||||||
Sbjct: 4 gggcctgtttggcacagctctagctctacttccattctttctggagctggagctcagcca 63
Query: 68 aacag 72
|||||
Sbjct: 64 aacag 68
>49705_osa-miRf10490-akr:pmrd
Length = 75
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 48 ctggagctggagctcagccaaacagtttc 76
|||||||||||||||||||||||||||||
Sbjct: 47 ctggagctggagctcagccaaacagtttc 75
Score = 52.0 bits (26), Expect = 2e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 12 ctgtttggcacagctccagctccagctccacccctcctggagctggagct 61
|||||||||||||||||| ||| | || |||| || ||||||||||||||
Sbjct: 5 ctgtttggcacagctccaactctaacttcacctctgctggagctggagct 54
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 ctgtttggcacagctccagctccagctcca 41
||||||||| |||||||||||||||||||
Sbjct: 71 ctgtttggctgagctccagctccagctcca 42
>50830_osa-miRf11615-akr:pmrd
Length = 67
Score = 52.0 bits (26), Expect = 2e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 23 agctccagctccagctccacccctcctggagctggagctcagccaaacag 72
|||||||| || |||||||| | | ||||||||||||||||||| |||||
Sbjct: 50 agctccagttctagctccactctttctggagctggagctcagcccaacag 1
>50570_osa-miRf11355-akr:pmrd
Length = 109
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 agggcctgtttggcacagctccagctccagctccacc 43
||||||| ||||||||||||||| ||||| |||||||
Sbjct: 37 agggcctatttggcacagctccacctccacctccacc 1
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 5 taagggcctgtttggcacagctccagctcca 35
|||||| ||| ||||||||||||||||||||
Sbjct: 72 taagggtctgcttggcacagctccagctcca 102
>50572_osa-miRf11357-akr:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 5 taagggcctgtttggcacagctccagctcca 35
|||||| ||| ||||||||||||||||||||
Sbjct: 65 taagggtctgcttggcacagctccagctcca 95
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 7 agggcctgtttggcacagctccagctcca 35
||||||| ||||||||||||||| |||||
Sbjct: 30 agggcctatttggcacagctccacctcca 2
>50571_osa-miRf11356-akr:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 5 taagggcctgtttggcacagctccagctcca 35
|||||| ||| ||||||||||||||||||||
Sbjct: 65 taagggtctgcttggcacagctccagctcca 95
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 7 agggcctgtttggcacagctccagctcca 35
||||||| ||||||||||||||| |||||
Sbjct: 30 agggcctatttggcacagctccacctcca 2
>51216_osa-miRf12001-akr:pmrd
Length = 65
Score = 44.1 bits (22), Expect = 5e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 30 gctccagctccacccctcctggagctggagctcagccaaaca 71
|||||||||||| || | || ||||||||||||||||||||
Sbjct: 50 gctccagctccatccattttgaagctggagctcagccaaaca 9
>49656_osa-miRf10441-akr:pmrd
Length = 77
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 ctgtttggcacagctccagctccag 36
||||||||||||||||| |||||||
Sbjct: 11 ctgtttggcacagctcctgctccag 35
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 14 gtttggcacagctccagctc 33
||||||||||||||||||||
Sbjct: 70 gtttggcacagctccagctc 51
>50432_osa-miRf11217-akr:pmrd
Length = 69
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 14 gtttggcacagctccagctc 33
||||||||||||||||||||
Sbjct: 63 gtttggcacagctccagctc 44
