miRNEST 2.0, an integrative microRNA resource :: BLAST
>54831_vvi-miR171d:pmrd
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||||
Sbjct: 60 tgttgtttgattgagccgtgccaatatc 87
>51685_ptc-miR171b:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 44 agagctatgttgtttgattgagccgtgccaatatc 78
|||||| | ||||||||||||||||||||||||||
Sbjct: 57 agagctctattgtttgattgagccgtgccaatatc 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 14 gatattggtgcggttcaatc 33
>46880_aqc-miR171e:pmrd
Length = 102
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 52 gttgtttgattgagccgtgccaatatc 78
|||||||||||||||||||||||||||
Sbjct: 27 gttgtttgattgagccgtgccaatatc 1
>46876_aqc-miR171a:pmrd
Length = 102
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 52 gttgtttgattgagccgtgccaatatc 78
|||||||||||||||||||||||||||
Sbjct: 74 gttgtttgattgagccgtgccaatatc 100
>51882_ptc-miRf10060-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 58 ttgtttgattgagccgtgccaatatc 83
>51684_ptc-miR171a:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 67 ttgtttgattgagccgtgccaatatc 92
>48403_bra-miR171a:pmrd
Length = 85
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 57 ttgtttgattgagccgtgccaatatc 82
>48386_bol-miR171a:pmrd
Length = 96
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatatc 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 10 gatattggtgcggttcaatc 29
>48367_bna-miR171e:pmrd
Length = 92
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 62 ttgtttgattgagccgtgccaatatc 87
>48366_bna-miR171d:pmrd
Length = 96
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||||
Sbjct: 63 ttgtttgattgagccgtgccaatatc 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 10 gatattggtgcggttcaatc 29
>54452_sbi-miR171a:pmrd
Length = 161
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 54 tgtttgattgagccgtgccaatatc 78
|||||||||||||||||||||||||
Sbjct: 118 tgtttgattgagccgtgccaatatc 142
>54551_sly-miR171a:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatc 107
>48723_mtr-miR171g:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>48722_mtr-miR171d:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 55 gtttgattgagccgtgccaatatc 78
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>46978_ath-miR171b:pmrd
Length = 117
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 tgttgtttgattgagccgtgccaatatc 78
||||||| ||||||||||||||||||||
Sbjct: 68 tgttgttcgattgagccgtgccaatatc 95
>55029_zma-miR171b:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>54830_vvi-miR171c:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaat 19
|||||||||||||||||||
Sbjct: 12 gatattggtgcggttcaat 30
>54462_sbi-miR171k:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>51692_ptc-miR171i:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>51346_ppe-miR171:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatc 87
>51345_ppe-miR170:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatc 87
>48897_osa-miR171c:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatc 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 11 gatattggtgcggttcaatc 30
>48896_osa-miR171b:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
>48312_bdi-miR171c:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatc 84
>46979_ath-miR171c:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gatattggtgcggttcaatc 20
||||||||||||||||||||
Sbjct: 29 gatattggtgcggttcaatc 48
>46879_aqc-miR171d:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 tttgattgagccgtgccaatatc 78
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>55039_zma-miR171m:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatatc 78
||||||||||||||||||||||
Sbjct: 92 ttgattgagccgtgccaatatc 113
>55036_zma-miR171i:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatatc 78
||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatc 85
>55033_zma-miR171f:pmrd
Length = 155
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatatc 78
||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatc 135
>55024_zma-miR170m:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttgattgagccgtgccaatatc 78
||||||||||||||||||||||
Sbjct: 94 ttgattgagccgtgccaatatc 115
>48406_bra-miR171d:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatatc 90
>48405_bra-miR171c:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatatc 84
>48404_bra-miR171b:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatatc 91
>48365_bna-miR171c:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 59 ttgttcgattgagccgtgccaatatc 84
>48364_bna-miR171b:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 65 ttgttcgattgagccgtgccaatatc 90
>48363_bna-miR171a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 ttgtttgattgagccgtgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 66 ttgttcgattgagccgtgccaatatc 91
>46881_aqc-miR171f:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 45 gagctatgttgtttgattgagccgtgccaatatc 78
||||| |||| ||| |||||||||||||||||||
Sbjct: 49 gagctttgttatttaattgagccgtgccaatatc 82
>46878_aqc-miR171c:pmrd
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 45 gagctatgttgtttgattgagccgtgccaatatc 78
||||| |||| ||| |||||||||||||||||||
Sbjct: 34 gagctttgttatttaattgagccgtgccaatatc 1
>55037_zma-miR171j:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>55032_zma-miR171e:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>55031_zma-miR171d:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>54836_vvi-miR171i:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatc 89
>54828_vvi-miR171a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>54680_tae-miR170b:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatc 94
>54460_sbi-miR171i:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>54455_sbi-miR171d:pmrd
Length = 154
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135
>54453_sbi-miR171b:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatc 113
>52725_ptc-miRf10903-akr:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 60 tgattgagccgtgccaatatc 80
>51691_ptc-miR171h:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>51690_ptc-miR171g:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>51689_ptc-miR171f:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121
>51688_ptc-miR171e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatc 85
>49676_osa-miRf10461-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatatc 115
>48905_osa-miR171n:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
>48904_osa-miR171m:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48900_osa-miR171f:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatc 117
>48899_osa-miR171e:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>48898_osa-miR171d:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>48894_osa-miR170b:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48893_osa-miR170a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
>48663_hvv-miR171:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
>48662_hvv-miR170:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
>46877_aqc-miR171b:pmrd
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgattgagccgtgccaatatc 78
|||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatc 75
