miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48855_osa-miR166l:pmrd
Length = 117
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 gggattgttgtctggttcaaggtctccacattgtgcaaaatgttcattcatggaggcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gggattgttgtctggttcaaggtctccacattgtgcaaaatgttcattcatggaggcaca 71
Query: 61 ggatgcttggtgatctcggaccaggcttcaatccc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 72 ggatgcttggtgatctcggaccaggcttcaatccc 106
>54966_zma-miR166j:pmrd
Length = 154
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 67 ttggtgatctcggaccaggcttcaatccc 95
|||||||||||||||||||||||||||||
Sbjct: 106 ttggtgatctcggaccaggcttcaatccc 134
>54420_sbi-miR166e:pmrd
Length = 151
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||||||||
Sbjct: 108 gatctcggaccaggcttcaatccc 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 ttgttgtctggttcaaggtctccaca 30
|||||||||||||||||||| |||||
Sbjct: 26 ttgttgtctggttcaaggtcgccaca 51
>51631_ptc-miR166g:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 70 gtgatctcggaccaggcttcaatccc 95
||||||||||||||||||||| ||||
Sbjct: 68 gtgatctcggaccaggcttcattccc 93
>54970_zma-miR166n:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttcaatccc 95
|||||||||||||||||||| ||||
Sbjct: 69 tgatctcggaccaggcttcattccc 93
>54959_zma-miR166c:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttcaatccc 95
|||||||||||||||||||| ||||
Sbjct: 67 tgatctcggaccaggcttcattccc 91
>54796_vvi-miR166h:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttcaatccc 95
|||||||||||||||||||| ||||
Sbjct: 64 tgatctcggaccaggcttcattccc 88
>54419_sbi-miR166d:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttcaatccc 95
|||||||||||||||||||| ||||
Sbjct: 62 tgatctcggaccaggcttcattccc 86
>54416_sbi-miR166a:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgttgtctggttcaaggtctc 26
|||||||||||||||||||||
Sbjct: 7 tgttgtctggttcaaggtctc 27
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 84 gatctcggaccaggcttcattccc 107
>51632_ptc-miR166h:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttcaatccc 95
|||||||||||||||||||| ||||
Sbjct: 67 tgatctcggaccaggcttcattccc 91
>48854_osa-miR166k:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 ctcggaccaggcttcaatccc 95
|||||||||||||||||||||
Sbjct: 96 ctcggaccaggcttcaatccc 116
>48847_osa-miR166d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttcaatccc 95
|||||||||||||||||||| ||||
Sbjct: 86 tgatctcggaccaggcttcattccc 110
>48844_osa-miR166a:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgttgtctggttcaaggtctc 26
|||||||||||||||||||||
Sbjct: 26 tgttgtctggttcaaggtctc 46
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 106 gatctcggaccaggcttcattccc 129
>48713_mtr-miR166c:pmrd
Length = 171
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 gtgatctcggaccaggcttca 90
|||||||||||||||||||||
Sbjct: 145 gtgatctcggaccaggcttca 165
>48711_mtr-miR165:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttcaatccc 95
|||||||||||||||||||| ||||
Sbjct: 57 tgatctcggaccaggcttcattccc 81
>54973_zma-miR166q:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 65 gatctcggaccaggcttcattccc 88
>54972_zma-miR166p:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 67 gatctcggaccaggcttcattccc 90
>54967_zma-miR166k:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcaatccc 95
||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcaatccc 148
>54961_zma-miR166e:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 63 gatctcggaccaggcttcattccc 86
>54960_zma-miR166d:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 tgttgtctggttcaaggtct 25
||||||||||||||||||||
Sbjct: 7 tgttgtctggttcaaggtct 26
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 80 gatctcggaccaggcttcattccc 103
>54958_zma-miR166b:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 tgttgtctggttcaaggtct 25
||||||||||||||||||||
Sbjct: 7 tgttgtctggttcaaggtct 26
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 92 gatctcggaccaggcttcattccc 115
>54957_zma-miR166a:pmrd
Length = 213
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 185 gatctcggaccaggcttcattccc 208
>54789_vvi-miR166a:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttca 90
||||||||||||||||||||
Sbjct: 95 tgatctcggaccaggcttca 114
>54423_sbi-miR166h:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 158 gatctcggaccaggcttcattccc 181
>54422_sbi-miR166g:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcaatccc 95
||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcaatccc 114
>51639_ptc-miR166o:pmrd
Length = 324
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttca 90
||||||||||||||||||||
Sbjct: 291 tgatctcggaccaggcttca 310
>51638_ptc-miR166n:pmrd
Length = 331
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 tgatctcggaccaggcttca 90
||||||||||||||||||||
Sbjct: 298 tgatctcggaccaggcttca 317
>48856_osa-miR166m:pmrd
Length = 200
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 68 tggtgatctcggaccaggcttcaatccc 95
|||||| |||||||||||||||| ||||
Sbjct: 139 tggtgacctcggaccaggcttcattccc 166
>48845_osa-miR166b:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 gatctcggaccaggcttcaatccc 95
||||||||||||||||||| ||||
Sbjct: 164 gatctcggaccaggcttcattccc 187
