miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>48882_osa-miR169g:pmrd
          Length = 126

 Score =  210 bits (106), Expect = 2e-55
 Identities = 106/106 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagccaaggatgacttgcctattgtgctcttctgaatgatgcagtgccatgatcagtgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  tagccaaggatgacttgcctattgtgctcttctgaatgatgcagtgccatgatcagtgtg 70

                                                         
Query: 61  gcctggctggttcagatgagccgagataggcagtctccttggctag 106
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  gcctggctggttcagatgagccgagataggcagtctccttggctag 116




>51675_ptc-miR169r:pmrd
          Length = 119

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  tagccaaggatgacttgcctatt 23
          |||||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctatt 33




>48354_bna-miR169e:pmrd
          Length = 276

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 1   tagccaaggatgacttgcctatt 23
           |||||||||||||||||||||||
Sbjct: 251 tagccaaggatgacttgcctatt 273




>48352_bna-miR169c:pmrd
          Length = 176

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  tagccaaggatgacttgcctatt 23
          |||||||||||||||||||||||
Sbjct: 26 tagccaaggatgacttgcctatt 48




>55015_zma-miR169m:pmrd
          Length = 89

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tagccaaggatgacttgcctat 22
          ||||||||||||||||||||||
Sbjct: 1  tagccaaggatgacttgcctat 22



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  ataggcagtctccttggcta 105
           ||||||||||||||||||||
Sbjct: 70  ataggcagtctccttggcta 89




>55014_zma-miR169l:pmrd
          Length = 89

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tagccaaggatgacttgcctat 22
          ||||||||||||||||||||||
Sbjct: 1  tagccaaggatgacttgcctat 22




>55010_zma-miR169h:pmrd
          Length = 128

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tagccaaggatgacttgcctat 22
          ||||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctat 42



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  taggcagtctccttggctag 106
           ||||||||||||||||||||
Sbjct: 91  taggcagtctccttggctag 110




>55007_zma-miR169e:pmrd
          Length = 128

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   tagccaaggatgacttgcctat 22
           ||||||||||||||||||||||
Sbjct: 109 tagccaaggatgacttgcctat 88



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  taggcagtctccttggctag 106
           ||||||||||||||||||||
Sbjct: 39  taggcagtctccttggctag 20




>55006_zma-miR169d:pmrd
          Length = 128

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   tagccaaggatgacttgcctat 22
           ||||||||||||||||||||||
Sbjct: 109 tagccaaggatgacttgcctat 88



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  ataggcagtctccttggctag 106
           |||||||||||||||||||||
Sbjct: 40  ataggcagtctccttggctag 20




>54450_sbi-miR169n:pmrd
          Length = 93

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tagccaaggatgacttgcctat 22
          ||||||||||||||||||||||
Sbjct: 3  tagccaaggatgacttgcctat 24




>54449_sbi-miR169m:pmrd
          Length = 92

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tagccaaggatgacttgcctat 22
          ||||||||||||||||||||||
Sbjct: 1  tagccaaggatgacttgcctat 22




>55009_zma-miR169g:pmrd
          Length = 140

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41




>55008_zma-miR169f:pmrd
          Length = 150

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41




>54826_vvi-miR169x:pmrd
          Length = 125

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 12 tagccaaggatgacttgccta 32




>54550_sly-miR169d:pmrd
          Length = 176

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 39 tagccaaggatgacttgccta 59




>54448_sbi-miR169l:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  ataggcagtctccttggctag 106
           |||||||||||||||||||||
Sbjct: 22  ataggcagtctccttggctag 2



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 94 tagccaaggatgacttgcct 75




>54440_sbi-miR169d:pmrd
          Length = 125

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41




>54439_sbi-miR169c:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41




>48884_osa-miR169i:pmrd
          Length = 108

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 86  ataggcagtctccttggctag 106
           |||||||||||||||||||||
Sbjct: 79  ataggcagtctccttggctag 99



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>48881_osa-miR169f:pmrd
          Length = 170

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgccta 31




>48355_bna-miR169f:pmrd
          Length = 201

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 31 tagccaaggatgacttgccta 51




>48353_bna-miR169d:pmrd
          Length = 220

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 40 tagccaaggatgacttgccta 60




>46873_aqc-miR169a:pmrd
          Length = 158

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tagccaaggatgacttgccta 21
          |||||||||||||||||||||
Sbjct: 26 tagccaaggatgacttgccta 46




>55013_zma-miR169k:pmrd
          Length = 133

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40




>55012_zma-miR169j:pmrd
          Length = 151

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40




>55011_zma-miR169i:pmrd
          Length = 191

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40




>54807_vvi-miR169e:pmrd
          Length = 149

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 12 tagccaaggatgacttgcct 31




>54548_sly-miR169b:pmrd
          Length = 205

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   tagccaaggatgacttgcct 20
           ||||||||||||||||||||
Sbjct: 171 tagccaaggatgacttgcct 190




>54444_sbi-miR169h:pmrd
          Length = 155

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40




>54443_sbi-miR169g:pmrd
          Length = 152

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40




>54442_sbi-miR169f:pmrd
          Length = 148

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40




>54441_sbi-miR169e:pmrd
          Length = 240

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40




>52726_ptc-miRf10904-akr:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 15 tagccaaggatgacttgcct 34




>51670_ptc-miR169m:pmrd
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>51669_ptc-miR169l:pmrd
          Length = 143

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>51668_ptc-miR169k:pmrd
          Length = 203

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>51667_ptc-miR169j:pmrd
          Length = 137

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>51666_ptc-miR169i:pmrd
          Length = 123

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>48892_osa-miR169q:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 98 tagccaaggatgacttgcct 79




>48888_osa-miR169m:pmrd
          Length = 138

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>48887_osa-miR169l:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>48886_osa-miR169k:pmrd
          Length = 156

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>48885_osa-miR169j:pmrd
          Length = 125

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>48883_osa-miR169h:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30




>48487_ghb-miR169a:pmrd
          Length = 189

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 50 tagccaaggatgacttgcct 69




>48361_bna-miR169l:pmrd
          Length = 199

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 25 tagccaaggatgacttgcct 44




>48360_bna-miR169k:pmrd
          Length = 155

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 34 tagccaaggatgacttgcct 53




>48359_bna-miR169j:pmrd
          Length = 167

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 9  tagccaaggatgacttgcct 28




>48358_bna-miR169i:pmrd
          Length = 174

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 15 tagccaaggatgacttgcct 34




>48357_bna-miR169h:pmrd
          Length = 176

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 37 tagccaaggatgacttgcct 56




>48356_bna-miR169g:pmrd
          Length = 168

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 37 tagccaaggatgacttgcct 56




>47103_ath-miRf10003-akr:pmrd
          Length = 141

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   tagccaaggatgacttgcct 20
           ||||||||||||||||||||
Sbjct: 121 tagccaaggatgacttgcct 102




>46974_ath-miR169n:pmrd
          Length = 215

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 45 tagccaaggatgacttgcct 64




>46973_ath-miR169m:pmrd
          Length = 212

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 42 tagccaaggatgacttgcct 61




>46972_ath-miR169l:pmrd
          Length = 211

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 44 tagccaaggatgacttgcct 63




>46971_ath-miR169k:pmrd
          Length = 213

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 43 tagccaaggatgacttgcct 62




>46970_ath-miR169j:pmrd
          Length = 221

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 51 tagccaaggatgacttgcct 70




>46969_ath-miR169i:pmrd
          Length = 206

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 40 tagccaaggatgacttgcct 59




>46968_ath-miR169h:pmrd
          Length = 190

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 46 tagccaaggatgacttgcct 65




>46874_aqc-miR169b:pmrd
          Length = 180

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tagccaaggatgacttgcct 20
          ||||||||||||||||||||
Sbjct: 1  tagccaaggatgacttgcct 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  ataggcagtctccttggcta 105
           ||||||||||||||||||||
Sbjct: 159 ataggcagtctccttggcta 178