miRNEST 2.0, an integrative microRNA resource :: BLAST
>54742_tae-miR2024a:pmrd
Length = 118
Score = 89.7 bits (45), Expect = 4e-19
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattagatga 60
|||||||||||||||| |||||||||||||||||||| ||| |||||||| | | | |
Sbjct: 2 gcaccaagcatgaggcgacaactgcattacttgcaaggaagttacaaaatctatgggtca 61
Query: 61 t--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctg 110
| || | ||| |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 62 tcataatcgtgactttctcgcaagttgtgcagttgctgtctcaagcttgctg 113
>54691_tae-miR444:pmrd
Length = 426
Score = 85.7 bits (43), Expect = 6e-18
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand = Plus / Plus
Query: 22 ctgcattacttgcaagaaaggcacaaaatcattagatgat-----tacttgtggctttct 76
||||||||||||||| ||||| |||||| | |||| ||| |||||||||||||||
Sbjct: 79 ctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttct 138
Query: 77 tgcaagttgtgcagttgctgcctcaagcttgctgc 111
||||||| ||||||||||||||||||||||||||
Sbjct: 139 tgcaagtcatgcagttgctgcctcaagcttgctgc 173
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgc 34
||||| ||||||||||||||||||||||||||||
Sbjct: 23 gcaccgagcatgaggcaacaactgcattacttgc 56
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaa 47
||||| ||||||| ||||||||| ||||||||||||| |||||
Sbjct: 169 caagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
>54743_tae-miR2024b:pmrd
Length = 142
Score = 83.8 bits (42), Expect = 2e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 62 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 89 tacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgc 138
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgc 34
||||| ||||||||||||||||||||||||||||
Sbjct: 5 gcaccgagcatgaggcaacaactgcattacttgc 38
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaaggcacaa 47
||||| ||||||| ||||||||| ||||||||||||| |||||
Sbjct: 134 caagcttgaggcagcaactgcatgacttgcaagaaagccacaa 92
>49007_osa-miR444f:pmrd
Length = 154
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 71 ctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgc 149
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgcaag 37
||||||||||||||| ||||||||||||||||||||
Sbjct: 7 gcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaag 41
||||| |||||||||||||||| |||||||||||||
Sbjct: 145 caagcttgaggcaacaactgcacaacttgcaagaaag 109
>48798_oru-miR444:pmrd
Length = 165
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 71 ctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 114 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgc 154
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcattacttgcaag 37
||||||||||||||| ||||||||||||||||||||
Sbjct: 12 gcaccaagcatgaggttacaactgcattacttgcaag 48
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaag 41
||||| |||||||||||||||| |||||||||||||
Sbjct: 150 caagcttgaggcaacaactgcacaacttgcaagaaag 114
>54376_pvi-miR444:pmrd
Length = 127
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
|||||||||||||||||||||| || ||||||||||||||
Sbjct: 77 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 72 tttcttgcaagttgtgcagttgctgcctcaagcttg 107
||||||||||| | ||||||||||||||| ||||||
Sbjct: 50 tttcttgcaagatatgcagttgctgcctctagcttg 15
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 5 caagcatgaggcaacaactgcattacttgcaagaaa 40
||||| |||| ||||||||||| ||||||||||||
Sbjct: 112 caagcttgagacaacaactgcacaacttgcaagaaa 77
>48319_bdi-miR444:pmrd
Length = 110
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 80 aagttgtgcagttgctgcctcaagcttgctgc 111
||||| ||||||||||||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
>49006_osa-miR444e:pmrd
Length = 140
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 78 gcaagttgtgcagttgctgcctcaagcttgctgc 111
||||||| ||||||||||||||||||||| ||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgc 124
>55114_zma-miR444a:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 ttgctgcctcaagcttgctgc 111
|||||||||||||||||||||
Sbjct: 1 ttgctgcctcaagcttgctgc 21
