miRNEST 2.0, an integrative microRNA resource :: BLAST
>48832_osa-miR160m:pmrd
Length = 82
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 61
Query: 61 tggcgtgcaaggagccaagc 80
||||||||||||||||||||
Sbjct: 62 tggcgtgcaaggagccaagc 81
>48827_osa-miR160b:pmrd
Length = 139
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 90
Query: 61 tggcgtgcaaggagccaagc 80
||||||||||||||||||||
Sbjct: 91 tggcgtgcaaggagccaagc 110
>54405_sbi-miR160b:pmrd
Length = 82
Score = 111 bits (56), Expect = 7e-26
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 60
||||||||||||| ||||||| |||||||||||| || ||| ||| ||||||||||||||
Sbjct: 2 gcctggctccctgtatgccacacatgtagcccaacccgtggcgtgattggatgctgtggg 61
Query: 61 tggcgtgcaaggagccaagc 80
||||||||||||||||||||
Sbjct: 62 tggcgtgcaaggagccaagc 81
>54947_zma-miR160m:pmrd
Length = 81
Score = 95.6 bits (48), Expect = 4e-21
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 60
||||||||||||| ||||||| ||||||||| || || ||| ||| ||||||||||||||
Sbjct: 2 gcctggctccctgtatgccacacatgtagcc-aacccgtggcgtgattggatgctgtggg 60
Query: 61 tggcgtgcaaggagccaagc 80
||||||||||||||||||||
Sbjct: 61 tggcgtgcaaggagccaagc 80
>54939_zma-miR160b:pmrd
Length = 121
Score = 95.6 bits (48), Expect = 4e-21
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 60
||||||||||||| ||||||| ||||||||| || || ||| ||| ||||||||||||||
Sbjct: 22 gcctggctccctgtatgccacacatgtagcc-aacccgtggcgtgattggatgctgtggg 80
Query: 61 tggcgtgcaaggagccaagc 80
||||||||||||||||||||
Sbjct: 81 tggcgtgcaaggagccaagc 100
>54404_sbi-miR160a:pmrd
Length = 84
Score = 61.9 bits (31), Expect = 6e-11
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagcccaatcc--atggtgtgtttggatgctgtg 58
||||||||||||| ||||||| |||||||||||| || ||| | | ||| |||||||
Sbjct: 2 gcctggctccctgtatgccacacatgtagcccaacccatatgctaaggttgcctgctgtg 61
Query: 59 ggtggcgtgcaaggagccaagc 80
|||||||||||||| |||||||
Sbjct: 62 ggtggcgtgcaaggggccaagc 83
>48826_osa-miR160a:pmrd
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagcccaatccatggtgt 44
||||||||||||| ||||||| ||||||| |||| |||||||||
Sbjct: 5 gcctggctccctgtatgccacacatgtagaccaacccatggtgt 48
>54945_zma-miR160h:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 52 tgctgtgggtggcgtgcaaggagccaagc 80
||||||||||||||||||||| |||||||
Sbjct: 57 tgctgtgggtggcgtgcaaggggccaagc 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagc 30
||||||||||||| ||||||| ||||||||
Sbjct: 2 gcctggctccctgtatgccacacatgtagc 31
>54944_zma-miR160g:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 52 tgctgtgggtggcgtgcaaggagccaagc 80
||||||||||||||||||||| |||||||
Sbjct: 57 tgctgtgggtggcgtgcaaggggccaagc 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagc 30
||||||||||||| ||||||| ||||||||
Sbjct: 2 gcctggctccctgtatgccacacatgtagc 31
>54938_zma-miR160a:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 52 tgctgtgggtggcgtgcaaggagccaagc 80
||||||||||||||||||||| |||||||
Sbjct: 66 tgctgtgggtggcgtgcaaggggccaagc 94
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcatgtagc 30
||||||||||||| ||||||| ||||||||
Sbjct: 11 gcctggctccctgtatgccacacatgtagc 40
>51361_ppt-miR160c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccact 22
||||||||||||||||||||||
Sbjct: 12 gcctggctccctgcatgccact 33
>54940_zma-miR160c:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcat 25
||||||||||||| |||||||||||
Sbjct: 8 gcctggctccctgtatgccactcat 32
>54759_ttu-miR160a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcat 25
||||||||||||| |||||||||||
Sbjct: 2 gcctggctccctgtatgccactcat 26
>54406_sbi-miR160c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcat 25
||||||||||||| |||||||||||
Sbjct: 2 gcctggctccctgtatgccactcat 26
>48828_osa-miR160c:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactcat 25
||||||||||||| |||||||||||
Sbjct: 8 gcctggctccctgtatgccactcat 32
>51615_ptc-miR160h:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgcatgcca 31
>54946_zma-miR160i:pmrd
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactc 23
||||||||||||| |||||||||
Sbjct: 3 gcctggctccctgtatgccactc 25
>54942_zma-miR160e:pmrd
Length = 94
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactc 23
||||||||||||| |||||||||
Sbjct: 10 gcctggctccctgtatgccactc 32
>54941_zma-miR160d:pmrd
Length = 142
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactc 23
||||||||||||| |||||||||
Sbjct: 22 gcctggctccctgtatgccactc 44
>54780_vvi-miR160c:pmrd
Length = 106
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 58 gggtggcgtgcaaggagccaagc 80
||||||||||| |||||||||||
Sbjct: 71 gggtggcgtgcgaggagccaagc 93
>54675_tae-miR160:pmrd
Length = 148
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactc 23
||||||||||||| |||||||||
Sbjct: 23 gcctggctccctgtatgccactc 45
>54408_sbi-miR160e:pmrd
Length = 95
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactc 23
||||||||||||| |||||||||
Sbjct: 2 gcctggctccctgtatgccactc 24
>54407_sbi-miR160d:pmrd
Length = 100
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactc 23
||||||||||||| |||||||||
Sbjct: 2 gcctggctccctgtatgccactc 24
>51362_ppt-miR160d:pmrd
Length = 100
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgcc 19
|||||||||||||||||||
Sbjct: 12 gcctggctccctgcatgcc 30
>48833_osa-miR160n:pmrd
Length = 131
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactc 23
||||||||||||| |||||||||
Sbjct: 2 gcctggctccctgtatgccactc 24
>48829_osa-miR160d:pmrd
Length = 142
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gcctggctccctgcatgccactc 23
||||||||||||| |||||||||
Sbjct: 9 gcctggctccctgtatgccactc 31
>48791_oba-miR160:pmrd
Length = 90
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 58 gggtggcgtgcaaggagccaagc 80
||||||||||| |||||||||||
Sbjct: 64 gggtggcgtgcgaggagccaagc 86
