miRNEST 2.0, an integrative microRNA resource :: BLAST
>49007_osa-miR444f:pmrd
Length = 154
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 69 tttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||||||||||||||||||||||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagctt 144
>48798_oru-miR444:pmrd
Length = 165
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 69 tttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||||||||||||||||||||||||||
Sbjct: 115 tttcttgcaagttgtgcagttgttgcctcaagctt 149
>54376_pvi-miR444:pmrd
Length = 127
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||||||||||||||||| |||||||||
Sbjct: 76 ttttcttgcaagttgtgcagttgttgtctcaagctt 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
|||||||||||| | |||||||| |||||| |||||
Sbjct: 51 ttttcttgcaagatatgcagttgctgcctctagctt 16
>54743_tae-miR2024b:pmrd
Length = 142
Score = 61.9 bits (31), Expect = 8e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
||||||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 87 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 133
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaa 42
|||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 133 aagcttgaggcagcaactgcatgacttgcaagaaagccacaa 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 agcatgaggcaggaactgcattacttgc 29
||||||||||| |||||||||||||||
Sbjct: 11 agcatgaggcaacaactgcattacttgc 38
>54691_tae-miR444:pmrd
Length = 426
Score = 61.9 bits (31), Expect = 8e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
||||||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaa 42
|||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 168 aagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 agcatgaggcaggaactgcattacttgc 29
||||||||||| |||||||||||||||
Sbjct: 29 agcatgaggcaacaactgcattacttgc 56
>54742_tae-miR2024a:pmrd
Length = 118
Score = 54.0 bits (27), Expect = 2e-08
Identities = 84/103 (81%)
Strand = Plus / Plus
Query: 1 aagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacata 60
||||||||||| |||||||||||||||||| |||| |||||||| || | ||||
Sbjct: 7 aagcatgaggcgacaactgcattacttgcaaggaagttacaaaatctatgggtcatcata 66
Query: 61 cttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
| ||| ||||| |||||||||||||||| || |||||||||
Sbjct: 67 atcgtgactttctcgcaagttgtgcagttgctgtctcaagctt 109
>49006_osa-miR444e:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 75 gcaagttgtgcagttgttgcctcaagctt 103
||||||| |||||||| ||||||||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagctt 119
