miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 54.0 bits (27), Expect = 3e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 62
|||||||||||||||||||||||| ||| | |||| | || ||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 63 ccc 65
|||
Sbjct: 71 ccc 73
Score = 52.0 bits (26), Expect = 1e-07
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 96 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 155
|||||||||||||| |||||| | |||||||| || ||||||| |||||||||||
Sbjct: 111 ttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttggattgaa 170
Query: 156 gggagctcta 165
||||||||||
Sbjct: 171 gggagctcta 180
>54540_sly-miR159:pmrd
Length = 177
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 136 tgatccttttttggattgaagggagctcta 165
||||| ||||||||||||||||||||||||
Sbjct: 148 tgatcattttttggattgaagggagctcta 177
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 137 gatccttttttggattgaagggagctcta 165
||||| |||||||||||||||||||||||
Sbjct: 141 gatccctttttggattgaagggagctcta 169
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagagg 26
||||||||||||||||||||||||
Sbjct: 8 gagctccttgaagtccaatagagg 31
>51604_ptc-miR159c:pmrd
Length = 183
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 137 gatccttttttggattgaagggagctcta 165
||||| |||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctcta 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagagg 26
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>51603_ptc-miR159b:pmrd
Length = 187
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 137 gatccttttttggattgaagggagctcta 165
|||| ||||||||||||||||||||||||
Sbjct: 150 gatctttttttggattgaagggagctcta 178
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaataga 24
||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaataga 34
>51602_ptc-miR159a:pmrd
Length = 183
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 137 gatccttttttggattgaagggagctcta 165
||||| |||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctcta 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagagg 26
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>54378_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatct 30
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 138 atccttttttggattgaagggagctcta 165
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>54377_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatct 30
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 138 atccttttttggattgaagggagctcta 165
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>48539_gma-miR159a:pmrd
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 gagctccttgaagtccaatagaggatct 30
||||||||||||||||||| ||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatct 50
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 140 ccttttttggattgaagggagctcta 165
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>48686_ltu-miR159:pmrd
Length = 345
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48395_bra-miR159a:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctcta 165
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54931_zma-miR159b:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctct 201
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54673_tae-miR159a:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 145 tttggattgaagggagctct 164
||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctct 225
