miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 79.8 bits (40), Expect = 6e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
|||||||||||||||||||||||||| | |||| ||| ||| |||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 attccaca 68
|| |||||
Sbjct: 71 atcccaca 78
Score = 52.0 bits (26), Expect = 1e-07
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 107 ggcttgcatacctcaggagctgcattacctga-gttgcatcatgttttggattgaaggga 165
|||||||||| |||||||||| ||||||| | ||| ||| | ||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaaggga 172
Query: 166 gctcta 171
||||||
Sbjct: 173 gctcta 178
>54777_vvi-miR159c:pmrd
Length = 190
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcatta 133
||||||||||||||||||||| ||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatatctcaggagctgcatta 141
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctga 53
|||||||||||||||||||||||| | | || || ||| ||||||||||||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctga 61
>54378_pvu-miR159:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 2e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
||||||||||||||||||||| || ||| || || ||| |||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 attccacacttcta 74
|| ||||| |||||
Sbjct: 62 atcccacagttcta 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>54377_pvu-miR159:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 2e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
||||||||||||||||||||| || ||| || || ||| |||||||||||| |||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 attccacacttcta 74
|| ||||| |||||
Sbjct: 62 atcccacagttcta 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 61.9 bits (31), Expect = 1e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 59
|||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 6 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 64
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 ttttggattgaagggagctcta 171
||||||||||||||||||||||
Sbjct: 148 ttttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 61.9 bits (31), Expect = 1e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 59
|||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 ttttggattgaagggagctcta 171
||||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 61.9 bits (31), Expect = 1e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 59
|||||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 ttttggattgaagggagctcta 171
||||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctcta 174
>48539_gma-miR159a:pmrd
Length = 214
Score = 60.0 bits (30), Expect = 6e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatga 60
||||||||||||||||||||| || ||| || || ||| ||||||||||| |||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 attccacacttcta 74
|| ||||| |||||
Sbjct: 81 atcccacagttcta 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctcta 195
>54674_tae-miR159b:pmrd
Length = 255
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcat 131
||||||||| |||||||||| || ||||||||||||
Sbjct: 175 gataggcttatggcttgcatgccccaggagctgcat 210
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54540_sly-miR159:pmrd
Length = 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 144 atcatgttttggattgaagggagctcta 171
||||| ||||||||||||||||||||||
Sbjct: 150 atcattttttggattgaagggagctcta 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>48825_osa-miR159m:pmrd
Length = 249
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcat 131
||||||||| |||||||||| || ||||||||||||
Sbjct: 174 gataggcttatggcttgcatgccccaggagctgcat 209
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctct 248
>48819_osa-miR159a:pmrd
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcat 131
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcatacctcaggagctgcat 131
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>48686_ltu-miR159:pmrd
Length = 345
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48395_bra-miR159a:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54931_zma-miR159b:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctct 201
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54673_tae-miR159a:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 96 gataggcttgtggcttgcat 115
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctct 225
>48824_osa-miR159f:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 152 ttggattgaagggagctcta 171
||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctcta 178
>48820_osa-miR159b:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>48728_mtr-miR319b:pmrd
Length = 42
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 152 ttggattgaagggagctcta 171
||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctcta 20
>48657_hvv-miR159b:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48656_hvv-miR159a:pmrd
Length = 303
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>46932_ath-miR159b:pmrd
Length = 196
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctct 170
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
