miRNEST 2.0, an integrative microRNA resource :: BLAST
>54542_sly-miR162:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 102 gcaaaaggaatcggtcgataaacctctgcatcca 135
||||||||||||||||||||||||||||||||||
Sbjct: 65 gcaaaaggaatcggtcgataaacctctgcatcca 98
>54948_zma-miR162b:pmrd
Length = 130
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 108 ggaatcggtcgataaacctctgcatcca 135
||||||||||||||||||||||||||||
Sbjct: 102 ggaatcggtcgataaacctctgcatcca 129
>48707_mtr-miR162d:pmrd
Length = 87
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||||||||||||||||||||||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcc 29
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||||||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
>48706_mtr-miR162c:pmrd
Length = 86
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||||||||||||||||||||||||||
Sbjct: 85 tggatgcagcggttcatcgatctgttcc 58
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||||||||||||||||||||||||
Sbjct: 27 gaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||||||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||||||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>54784_vvi-miR162:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||||||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatcca 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||||||||||||||||||||| ||||
Sbjct: 10 tggatgcagcggttcatcgatctcttcc 37
>48834_osa-miR162a:pmrd
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 ggaatcggtcgataaacctctgcatcca 135
||||||| ||||||||||||||||||||
Sbjct: 135 ggaatcgatcgataaacctctgcatcca 162
>48545_gma-miR162a:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||||||||||||||||||||| ||||
Sbjct: 11 tggatgcagcggttcatcgatctcttcc 38
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||| ||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatcca 92
>54387_rco-miR162:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||| ||||||||||||||||||||
Sbjct: 68 gaatcgatcgataaacctctgcatcca 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 4 tggaggcagcggttcatcgatctcttcc 31
>48690_mdo-miR162:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||||||||||||||| ||||||||
Sbjct: 61 gaatcggtcgataaacctttgcatcca 87
>48682_llu-miR162:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||| ||||||||||||||||||||
Sbjct: 53 gaatcgatcgataaacctctgcatcca 79
>48493_ghr-miR162a:pmrd
Length = 148
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||| ||||||||||||||||||||
Sbjct: 87 gaatcgatcgataaacctctgcatcca 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 25 tggaggcagcggttcatcgatctcttcc 52
>48423_cpa-miR162a:pmrd
Length = 109
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||| ||||||||||||||||||||
Sbjct: 73 gaatcgatcgataaacctctgcatcca 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 14 tggaggcagcggttcatcgatctcttcc 41
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||| ||||||||||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatcca 16
>46938_ath-miR162b:pmrd
Length = 111
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 109 gaatcggtcgataaacctctgcatcca 135
|||||| ||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatcca 98
>48836_osa-miR162m:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 107 aggaatcggtcgataaacctctgcatcca 135
|||||||| ||||||| ||||||||||||
Sbjct: 85 aggaatcgatcgataagcctctgcatcca 113
>48835_osa-miR162b:pmrd
Length = 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 107 aggaatcggtcgataaacctctgcatcca 135
|||||||| ||||||| ||||||||||||
Sbjct: 95 aggaatcgatcgataagcctctgcatcca 123
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatcca 8
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 93 tggaggcagcggttcatcgatcttttcc 66
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatcca 10
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 95 tggaggcagcggttcatcgatcttttcc 68
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatcca 9
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 94 tggaggcagcggttcatcgatctcttcc 67
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatcca 9
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 94 tggaggcagcggttcatcgatctcttcc 67
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatcca 10
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 95 tggaggcagcggttcatcgatcttttcc 68
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatcca 8
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 93 tggaggcagcggttcatcgatcttttcc 66
>51618_ptc-miR162c:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcc 39
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatcca 97
>51617_ptc-miR162b:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcc 39
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatcca 97
>51616_ptc-miR162a:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 12 tggaggcagcggttcatcgatctcttcc 39
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatcca 97
>48685_lsa-miR162:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatcca 20
>48546_gma-miR162m:pmrd
Length = 367
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatcca 20
>46937_ath-miR162a:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 26 tggaggcagcggttcatcgatctcttcc 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 116 tcgataaacctctgcatcca 135
||||||||||||||||||||
Sbjct: 89 tcgataaacctctgcatcca 108
