miRNEST 2.0, an integrative microRNA resource :: BLAST
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 65.9 bits (33), Expect = 9e-12
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||||
Sbjct: 7 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 66
Query: 61 ttccacagtccta 73
||||||||||||
Sbjct: 67 -tccacagtccta 78
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 91 ggataggcttgcggcttgcatatgttaggagctttatt 128
||||||| ||||||||||||||| | ||||||||||||
Sbjct: 92 ggataggtttgcggcttgcatatctcaggagctttatt 129
>51604_ptc-miR159c:pmrd
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 ttccacagtccta 73
||||||||||||
Sbjct: 72 -tccacagtccta 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 91 ggataggcttgcggcttgcatatgttaggagctttatt 128
||||||| ||||||||||||||| | ||||||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttatt 134
>51603_ptc-miR159b:pmrd
Length = 187
Score = 65.9 bits (33), Expect = 9e-12
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 100 tgcggcttgcatatgttaggagctttattacctctttgttttatctttctttggattgaa 159
|||||||||||||| | |||||||||||||||| |||| |||||| |||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacct-aatgttagatctttttttggattgaa 168
Query: 160 gggagctct 168
|||||||||
Sbjct: 169 gggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 ttccacagtccta 73
||||||||||||
Sbjct: 72 -tccacagtccta 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 91 ggataggcttgcggcttgcatatgttaggagctttatt 128
||||||| ||||||||||||||| | ||||||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttatt 134
>54540_sly-miR159:pmrd
Length = 177
Score = 60.0 bits (30), Expect = 6e-10
Identities = 58/65 (89%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 106 ttgcatatgttaggagctttatt--acctctttgttttatctttctttggattgaaggga 163
|||||||||| |||||||||||| ||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 164 gctct 168
|||||
Sbjct: 172 gctct 176
>48699_mtr-miR159a:pmrd
Length = 168
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 137 gttttatctttctttggattgaagggagctct 168
|||| |||||||||||||||||||||||||||
Sbjct: 136 gtttaatctttctttggattgaagggagctct 167
>54777_vvi-miR159c:pmrd
Length = 190
Score = 50.1 bits (25), Expect = 5e-07
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| ||||| | || | ||||| || ||||||||| ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 ttccacagtccta 73
| |||||| ||||
Sbjct: 70 tcccacagcccta 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 91 ggataggcttgcggcttgcatatgttaggagct 123
||||||||||| ||||||||||| | |||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagct 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 tttggattgaagggagctct 168
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>48539_gma-miR159a:pmrd
Length = 214
Score = 50.1 bits (25), Expect = 5e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| |||||| || | |||| ||| ||||||| | |||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 ttccacagt 69
| |||||||
Sbjct: 82 tcccacagt 90
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctct 194
>54378_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctct 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| |||||| || | |||| || ||||||| | |||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 ttccacagt 69
| |||||||
Sbjct: 63 tcccacagt 71
>54377_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctct 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgga 60
||||||||||||||||||| |||||| || | |||| || ||||||| | |||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 ttccacagt 69
| |||||||
Sbjct: 63 tcccacagt 71
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctct 180
>46932_ath-miR159b:pmrd
Length = 196
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 146 ttctttggattgaagggagctct 168
|||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctct 182
>54930_zma-miR159a:pmrd
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>54631_sof-miR159d:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 147 tctttggattgaagggagctct 168
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
