miRNEST 2.0, an integrative microRNA resource :: BLAST
>48338_bna-miR156c:pmrd
Length = 155
Score = 139 bits (70), Expect = 6e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 65 ggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactcttttgtgc 124
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 ggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctttactcttttgtgc 120
Query: 125 tctctatacttctg 138
||||||||||||||
Sbjct: 121 tctctatacttctg 134
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgcaagtaca 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 22 cagaagatagagagcactaaggatgacatgcaagtaca 59
>46926_ath-miR157c:pmrd
Length = 217
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 87
Query: 61 aagtggat 68
| ||||||
Sbjct: 88 atgtggat 95
>48393_bra-miR157a:pmrd
Length = 149
Score = 95.6 bits (48), Expect = 8e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 60
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 18 cagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacaccgc 77
Score = 65.9 bits (33), Expect = 7e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 94 aaaaagagcctgcatctctactcttttgtgctctctatacttctg 138
||||| ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 92 aaaaatagcctgcatgtctactctttcgtgctctctatacttctg 136
>48337_bna-miR156b:pmrd
Length = 208
Score = 95.6 bits (48), Expect = 8e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 60
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 29 cagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacaccgc 88
>48384_bol-miR157a:pmrd
Length = 106
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgcaagtaca 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 10 cagaagatagagagcactaaggatgacatgcaagtaca 47
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 105 gcatctctactcttttgtgctctctatacttctg 138
|||||| |||||||||||||||||||||||||||
Sbjct: 65 gcatctttactcttttgtgctctctatacttctg 98
>46927_ath-miR157d:pmrd
Length = 221
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatg 25
|||||||||||||||||||||||||
Sbjct: 27 cagaagatagagagcactaaggatg 51
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 103 ctgcatctctactcttttgtgctctctatacttctg 138
||||||||||| || | |||||||||||| ||||||
Sbjct: 155 ctgcatctctattcctatgtgctctctatgcttctg 190
>48698_mtr-miR157:pmrd
Length = 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||| ||||||||||||| |||||
Sbjct: 5 cagaagatagagggcactaaggatgatatgca 36
>54661_stu-miR157a:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgc 31
|||||||||||||||||||| ||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
>54532_sly-miR156a:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgc 31
|||||||||||||||||||| ||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
>48531_gma-miR156d:pmrd
Length = 151
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 112 tactcttttgtgctctctatacttctg 138
||||| |||||||||||||||||||||
Sbjct: 102 tactcctttgtgctctctatacttctg 128
>46862_aqc-miR156b:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 98 agagcctgcatctctactcttttgtgctctctatacttctg 138
|||| ||||||||| |||| |||||||||||||| ||||||
Sbjct: 39 agagtctgcatctc-actcctttgtgctctctatgcttctg 78
>54774_vvi-miR156i:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 99 gagcctgcatctctactcttttgtgctctctatacttctg 138
||||| ||||||| |||| |||||||||||||| ||||||
Sbjct: 49 gagccagcatctc-actcctttgtgctctctattcttctg 87
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||||||||| | ||||| |||||
Sbjct: 6 cagaagatagagagcactgacgatgaaatgca 37
>51598_ptc-miR156h:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||||||||| | ||||| |||||
Sbjct: 15 cagaagatagagagcactgacgatgaaatgca 46
>48537_gma-miR157c:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||||||||| | ||||| |||||
Sbjct: 80 cagaagatagagagcactgatgatgaaatgca 49
>48532_gma-miR156e:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||||||||| | ||||| |||||
Sbjct: 25 cagaagatagagagcactgatgatgaaatgca 56
