miRNEST 2.0, an integrative microRNA resource :: BLAST
>48395_bra-miR159a:pmrd
Length = 185
Score = 254 bits (128), Expect = 2e-68
Identities = 169/179 (94%), Gaps = 4/179 (2%)
Strand = Plus / Plus
Query: 5 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 64
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 67
Query: 65 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 123
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 68 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 124
Query: 124 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctcta 182
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 125 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 254 bits (128), Expect = 2e-68
Identities = 169/179 (94%), Gaps = 4/179 (2%)
Strand = Plus / Plus
Query: 5 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 64
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 65
Query: 65 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 123
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 66 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 122
Query: 124 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctcta 182
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 123 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 252 bits (127), Expect = 8e-68
Identities = 171/183 (93%), Gaps = 2/183 (1%)
Strand = Plus / Plus
Query: 1 tagagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatg 60
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2 tagagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatg 61
Query: 61 gatcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcata 119
||||||||||||||||| |||| | | ||||||||||| |||||||||| |||||||
Sbjct: 62 gatcccataagccctaatccttgtaaagtaaaaaaggattt-ggttatatggattgcata 120
Query: 120 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 180
Query: 180 cta 182
|||
Sbjct: 181 cta 183
>46932_ath-miR159b:pmrd
Length = 196
Score = 95.6 bits (48), Expect = 1e-20
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 2 agagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgg 61
|||||||||| |||||||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct: 4 agagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgg 63
Query: 62 atcccataagcc 73
||||||||||||
Sbjct: 64 atcccataagcc 75
>54378_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 cttctttggattgaagggagctcta 182
|||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctcta 173
>54377_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 cttctttggattgaagggagctcta 182
|||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctcta 173
>48539_gma-miR159a:pmrd
Length = 214
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 cttctttggattgaagggagctcta 182
|||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctcta 195
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 ggcttgcatatctcaggagcttta 133
||||||||||||||||||||||||
Sbjct: 104 ggcttgcatatctcaggagcttta 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 aagctgctaagctatggatcc 65
|||||||||||||||||||||
Sbjct: 49 aagctgctaagctatggatcc 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 ggcttgcatatctcaggagcttta 133
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 aagctgctaagctatggatcc 65
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51603_ptc-miR159b:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 ggcttgcatatctcaggagcttta 133
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>51602_ptc-miR159a:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 ggcttgcatatctcaggagcttta 133
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 aagctgctaagctatggatcc 65
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>48699_mtr-miR159a:pmrd
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 159 ttctttggattgaagggagctcta 182
||||||||||||||||||||||||
Sbjct: 145 ttctttggattgaagggagctcta 168
>54930_zma-miR159a:pmrd
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>54777_vvi-miR159c:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 109 tggcttgcatatctcaggagct 130
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>54631_sof-miR159d:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>54540_sly-miR159:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48686_ltu-miR159:pmrd
Length = 345
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
