miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 75.8 bits (38), Expect = 9e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
|||||||||||||||||||||||| | |||| ||| ||| |||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 tccaca 66
|||||
Sbjct: 73 cccaca 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 105 ggcttgcatacctcaggagctgcattacctga-gttgcatcatgttttggattgaaggga 163
|||||||||| |||||||||| ||||||| | ||| ||| | ||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaaggga 172
Query: 164 gctc 167
||||
Sbjct: 173 gctc 176
>54777_vvi-miR159c:pmrd
Length = 190
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcatta 131
||||||||||||||||||||| ||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatatctcaggagctgcatta 141
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctga 51
|||||||||||||||||||||| | | || || ||| ||||||||||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctga 61
>54378_pvu-miR159:pmrd
Length = 174
Score = 63.9 bits (32), Expect = 4e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
||||||||||||||||||| || ||| || || ||| |||||||||||| ||||||| ||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 tccacacttcta 72
||||| |||||
Sbjct: 64 cccacagttcta 75
>54377_pvu-miR159:pmrd
Length = 174
Score = 63.9 bits (32), Expect = 4e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
||||||||||||||||||| || ||| || || ||| |||||||||||| ||||||| ||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 tccacacttcta 72
||||| |||||
Sbjct: 64 cccacagttcta 75
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 58.0 bits (29), Expect = 2e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 57
|||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 8 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 64
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 ttttggattgaagggagctc 167
||||||||||||||||||||
Sbjct: 148 ttttggattgaagggagctc 167
>51604_ptc-miR159c:pmrd
Length = 183
Score = 58.0 bits (29), Expect = 2e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 57
|||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 ttttggattgaagggagctc 167
||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctc 172
>51602_ptc-miR159a:pmrd
Length = 183
Score = 58.0 bits (29), Expect = 2e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 57
|||||||||||||||||||||| | | ||||| ||| |||| ||||||| |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 148 ttttggattgaagggagctc 167
||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctc 172
>48539_gma-miR159a:pmrd
Length = 214
Score = 56.0 bits (28), Expect = 9e-09
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatgaat 60
||||||||||||||||||| || ||| || || ||| ||||||||||| ||||||| ||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 tccacacttcta 72
||||| |||||
Sbjct: 83 cccacagttcta 94
>54674_tae-miR159b:pmrd
Length = 255
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcat 129
||||||||| |||||||||| || ||||||||||||
Sbjct: 175 gataggcttatggcttgcatgccccaggagctgcat 210
>48825_osa-miR159m:pmrd
Length = 249
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcat 129
||||||||| |||||||||| || ||||||||||||
Sbjct: 174 gataggcttatggcttgcatgccccaggagctgcat 209
>48819_osa-miR159a:pmrd
Length = 272
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcat 129
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
>48796_oru-miR159:pmrd
Length = 274
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcatacctcaggagctgcat 129
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
>54540_sly-miR159:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 atcatgttttggattgaagggagctc 167
||||| ||||||||||||||||||||
Sbjct: 150 atcattttttggattgaagggagctc 175
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcat 113
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
