miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54381_pvu-miR399a:pmrd
          Length = 223

 Score =  113 bits (57), Expect = 2e-26
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggcttctctttgttggcaggaaatgacatgatcatctcatgaaatatcttgccaaagga 60
           |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||
Sbjct: 39  gggcttctctttgttggcaggaaatgacatgaccacttcatgaaatatcttgccaaagga 98

                    
Query: 61  gagttgccc 69
           |||||||||
Sbjct: 99  gagttgccc 107




>51755_ptc-miR399i:pmrd
          Length = 108

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 48 tcttgccaaaggagagttgccc 69
          ||||||||||||||||||||||
Sbjct: 76 tcttgccaaaggagagttgccc 97




>48756_mtr-miR399g:pmrd
          Length = 74

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 48 tcttgccaaaggagagttgccc 69
          ||||||||||||||||||||||
Sbjct: 51 tcttgccaaaggagagttgccc 72




>54878_vvi-miR399b:pmrd
          Length = 117

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  cttgccaaaggagagttgccc 69
           |||||||||||||||||||||
Sbjct: 85  cttgccaaaggagagttgccc 105




>47017_ath-miR399c:pmrd
          Length = 114

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  cttgccaaaggagagttgccc 69
           |||||||||||||||||||||
Sbjct: 82  cttgccaaaggagagttgccc 102




>55098_zma-miR399h:pmrd
          Length = 85

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 65 tgccaaaggagagttgccc 83




>55095_zma-miR399e:pmrd
          Length = 124

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 85  tgccaaaggagagttgccc 103




>54879_vvi-miR399c:pmrd
          Length = 82

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 52 tgccaaaggagagttgccc 70




>54561_sly-miR399:pmrd
          Length = 71

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 51 tgccaaaggagagttgccc 69




>54497_sbi-miR399i:pmrd
          Length = 121

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 82  tgccaaaggagagttgccc 100




>54492_sbi-miR399d:pmrd
          Length = 205

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccc 184




>48973_osa-miR399j:pmrd
          Length = 106

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 76 tgccaaaggagagttgccc 94




>48967_osa-miR399d:pmrd
          Length = 286

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccc 274




>48088_ath-miRf10988-akr:pmrd
          Length = 129

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 102 tgccaaaggagagttgccc 120




>47473_ath-miRf10373-akr:pmrd
          Length = 125

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 100 tgccaaaggagagttgccc 118




>47472_ath-miRf10372-akr:pmrd
          Length = 131

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 103 tgccaaaggagagttgccc 121




>47016_ath-miR399b:pmrd
          Length = 135

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  tgccaaaggagagttgccc 69
           |||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccc 123




>46891_aqc-miR399:pmrd
          Length = 98

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 51 tgccaaaggagagttgccc 69
          |||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgccc 90