miRNEST 2.0, an integrative microRNA resource :: BLAST
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 2e-12
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgg 59
|||||||||||||||||||| ||||| | |||| ||||| || |||||||||| ||||||
Sbjct: 6 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 65
Query: 60 attccacagtccta 73
| ||||||||||||
Sbjct: 66 a-tccacagtccta 78
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 93 ggataggcttgcggcttgcatatgttaggagcttt 127
||||||| ||||||||||||||| | |||||||||
Sbjct: 92 ggataggtttgcggcttgcatatctcaggagcttt 126
>51604_ptc-miR159c:pmrd
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgg 59
|||||||||||||||||||| ||||| | |||| ||||| || |||||||||| ||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 60 attccacagtccta 73
| ||||||||||||
Sbjct: 71 a-tccacagtccta 83
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 93 ggataggcttgcggcttgcatatgttaggagcttt 127
||||||| ||||||||||||||| | |||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagcttt 131
>51602_ptc-miR159a:pmrd
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgg 59
|||||||||||||||||||| ||||| | |||| ||||| || |||||||||| ||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 60 attccacagtccta 73
| ||||||||||||
Sbjct: 71 a-tccacagtccta 83
>54540_sly-miR159:pmrd
Length = 177
Score = 61.9 bits (31), Expect = 1e-10
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 108 ttgcatatgttaggagcttt--tttacctctttgttttatctttctttggattgaaggga 165
|||||||||| ||||||||| |||||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 166 gctcta 171
||||||
Sbjct: 172 gctcta 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>51603_ptc-miR159b:pmrd
Length = 187
Score = 60.0 bits (30), Expect = 6e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 102 tgcggcttgcatatgttaggagcttttttacctctttgttttatctttctttggattgaa 161
|||||||||||||| | ||||||||| |||||| | ||| |||||| |||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacctaat-gttagatctttttttggattgaa 168
Query: 162 gggagctcta 171
||||||||||
Sbjct: 169 gggagctcta 178
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaa 30
>48699_mtr-miR159a:pmrd
Length = 168
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 139 gttttatctttctttggattgaagggagctcta 171
|||| ||||||||||||||||||||||||||||
Sbjct: 136 gtttaatctttctttggattgaagggagctcta 168
>54378_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctcta 173
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 2 tggagctccttgaagtccaa 21
>54377_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctcta 173
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 2 tggagctccttgaagtccaa 21
>48539_gma-miR159a:pmrd
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctcta 195
Score = 44.1 bits (22), Expect = 3e-05
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgg 59
|||||||||||||||||||| |||||| || | |||| ||| ||||||| | ||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 60 attccacagt 69
|| |||||||
Sbjct: 81 atcccacagt 90
>48395_bra-miR159a:pmrd
Length = 185
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctcta 171
||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctcta 183
>46932_ath-miR159b:pmrd
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 148 ttctttggattgaagggagctct 170
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>54930_zma-miR159a:pmrd
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>54777_vvi-miR159c:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagagg 26
|||||||||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagg 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 93 ggataggcttgcggcttgcatatgttaggagct 125
||||||||||| ||||||||||| | |||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagct 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tttggattgaagggagctcta 171
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>54631_sof-miR159d:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 149 tctttggattgaagggagctct 170
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
