miRNEST 2.0, an integrative microRNA resource :: BLAST
>48680_lja-miR396:pmrd
Length = 108
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 56 cctctttgtattcttccacagctttcttgaact 88
|||||||||||||||||||||||||||||||||
Sbjct: 3 cctctttgtattcttccacagctttcttgaact 35
>48110_ath-miRf11010-akr:pmrd
Length = 165
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 52 tgaccctctttgtattcttccacagctttcttgaact 88
||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tgaccctctctgtattcttccacagctttcttgaact 37
>48578_gma-miR396a:pmrd
Length = 140
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 57 ctctttgtattcttccacagctttcttgaact 88
||||||||||||||||||||||||||||||||
Sbjct: 9 ctctttgtattcttccacagctttcttgaact 40
>54871_vvi-miR396d:pmrd
Length = 120
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 ctttgtattcttccacagctttcttgaact 88
||||||||||||||||||||||||||||||
Sbjct: 1 ctttgtattcttccacagctttcttgaact 30
>51735_ptc-miR396b:pmrd
Length = 132
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 ctttgtattcttccacagctttcttgaact 88
||||||||||||||||||||||||||||||
Sbjct: 1 ctttgtattcttccacagctttcttgaact 30
>52079_ptc-miRf10257-akr:pmrd
Length = 130
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 ttgtattcttccacagctttcttgaact 88
||||||||||||||||||||||||||||
Sbjct: 1 ttgtattcttccacagctttcttgaact 28
>47008_ath-miR396a:pmrd
Length = 151
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 tgtattcttccacagctttcttgaact 88
|||||||||||||||||||||||||||
Sbjct: 4 tgtattcttccacagctttcttgaact 30
>51734_ptc-miR396a:pmrd
Length = 123
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 gtattcttccacagctttcttgaact 88
||||||||||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaact 30
>55073_zma-miR396b:pmrd
Length = 136
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 58 tctttgtattcttccacagctttcttgaact 88
||||||| ||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaact 40
>54645_sof-miR396:pmrd
Length = 134
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 58 tctttgtattcttccacagctttcttgaact 88
||||||| ||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaact 40
>54486_sbi-miR396b:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 58 tctttgtattcttccacagctttcttgaact 88
||||||| ||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaact 40
>55079_zma-miR396h:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tcttccacagctttcttgaact 88
||||||||||||||||||||||
Sbjct: 2 tcttccacagctttcttgaact 23
>55074_zma-miR396c:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tcttccacagctttcttgaact 88
||||||||||||||||||||||
Sbjct: 2 tcttccacagctttcttgaact 23
>55072_zma-miR396a:pmrd
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tcttccacagctttcttgaact 88
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>54870_vvi-miR396c:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tcttccacagctttcttgaact 88
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>54485_sbi-miR396a:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tcttccacagctttcttgaact 88
||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40
>48946_osa-miR396b:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tcttccacagctttcttgaact 88
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>48945_osa-miR396a:pmrd
Length = 154
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tcttccacagctttcttgaact 88
||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaact 30
>55083_zma-miR396l:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>55082_zma-miR396k:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>55081_zma-miR396j:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>55080_zma-miR396i:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>55078_zma-miR396g:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>55077_zma-miR396f:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>54869_vvi-miR396b:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54868_vvi-miR396a:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54487_sbi-miR396c:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>53179_ptc-miRf11357-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
>52893_ptc-miRf11071-akr:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 142 ttccacagctttcttgaact 123
>52304_ptc-miRf10482-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 93 ttccacagctttcttgaact 74
>52080_ptc-miRf10258-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
>51738_ptc-miR396e:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51737_ptc-miR396d:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51736_ptc-miR396c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51564_pta-miR396:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
>48947_osa-miR396c:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>48748_mtr-miR396a:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>48580_gma-miR396c:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48579_gma-miR396b:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48508_ghr-miR396c:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>48507_ghr-miR396b:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>48485_gcl-miR396a:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 101 ttccacagctttcttgaact 82
>48374_bna-miR396a:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>47009_ath-miR396b:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>46888_aqc-miR396b:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>46887_aqc-miR396a:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 ttccacagctttcttgaact 88
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
