miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 69.9 bits (35), Expect = 6e-13
Identities = 140/172 (81%), Gaps = 6/172 (3%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||| | | ||| ||||| ||| ||||||||| |||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 attccacagtccta--accctaattaattatggggataggcttgcggcttgcatatgtta 118
|| |||||| |||| ||| | | | ||| || || ||| |||||||||||||| | |
Sbjct: 71 atcccacagccctatcaccatcagtcattttg---atgggcctgcggcttgcatatctca 127
Query: 119 ggagctttattacctctttgttttatctttctttggattgaagggagctcta 170
||||||||||||||| |||| |||||| |||||||||||||||||||||
Sbjct: 128 ggagctttattacct-aatgttagatctttttttggattgaagggagctcta 178
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 2e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||||| | |||| ||||| || |||||||| | ||||||
Sbjct: 6 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 65
Query: 61 attccacagtccta 74
| ||||||||||||
Sbjct: 66 a-tccacagtccta 78
Score = 54.0 bits (27), Expect = 3e-08
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagctttattacctctttgttttatctttctt 151
||||||| ||||||||||||||| | |||||||||||| ||| |||| ||| | ||
Sbjct: 92 ggataggtttgcggcttgcatatctcaggagctttattgcct-aatgttagatccctttt 150
Query: 152 tggattgaagggagctcta 170
|||||||||||||||||||
Sbjct: 151 tggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||||| | |||| ||||| || |||||||| | ||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 attccacagtccta 74
| ||||||||||||
Sbjct: 71 a-tccacagtccta 83
Score = 54.0 bits (27), Expect = 3e-08
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagctttattacctctttgttttatctttctt 151
||||||| ||||||||||||||| | |||||||||||| ||| |||| ||| | ||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcct-aatgttagatccctttt 155
Query: 152 tggattgaagggagctcta 170
|||||||||||||||||||
Sbjct: 156 tggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||||| | |||| ||||| || |||||||| | ||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 attccacagtccta 74
| ||||||||||||
Sbjct: 71 a-tccacagtccta 83
>54540_sly-miR159:pmrd
Length = 177
Score = 61.9 bits (31), Expect = 1e-10
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 107 ttgcatatgttaggagctttatt--acctctttgttttatctttctttggattgaaggga 164
|||||||||| |||||||||||| ||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 165 gctcta 170
||||||
Sbjct: 172 gctcta 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| | | || | |||| ||||| ||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 61 attccacagtccta 74
||||| ||| ||||
Sbjct: 61 attcctcagcccta 74
>48699_mtr-miR159a:pmrd
Length = 168
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 138 gttttatctttctttggattgaagggagctcta 170
|||| ||||||||||||||||||||||||||||
Sbjct: 136 gtttaatctttctttggattgaagggagctcta 168
>54777_vvi-miR159c:pmrd
Length = 190
Score = 52.0 bits (26), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| ||||| | || | ||||| || ||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 attccacagtccta 74
|| |||||| ||||
Sbjct: 69 atcccacagcccta 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagct 124
||||||||||| ||||||||||| | |||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagct 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 150 tttggattgaagggagctcta 170
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
>48539_gma-miR159a:pmrd
Length = 214
Score = 52.0 bits (26), Expect = 1e-07
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| |||||| || | |||| ||| ||||||| | ||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 attccacagt 70
|| |||||||
Sbjct: 81 atcccacagt 90
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctcta 195
>54378_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctcta 173
Score = 44.1 bits (22), Expect = 3e-05
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| |||||| || | |||| || ||||||| | ||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 attccacagt 70
|| |||||||
Sbjct: 62 atcccacagt 71
>54377_pvu-miR159:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctcta 173
Score = 44.1 bits (22), Expect = 3e-05
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatgg 60
|||||||||||||||||||| |||||| || | |||| || ||||||| | ||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 attccacagt 70
|| |||||||
Sbjct: 62 atcccacagt 71
>48395_bra-miR159a:pmrd
Length = 185
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctcta 170
||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctcta 183
>46932_ath-miR159b:pmrd
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>54930_zma-miR159a:pmrd
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>54631_sof-miR159d:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
