miRNEST 2.0, an integrative microRNA resource :: BLAST
>48395_bra-miR159a:pmrd
Length = 185
Score = 250 bits (126), Expect = 3e-67
Identities = 167/177 (94%), Gaps = 4/177 (2%)
Strand = Plus / Plus
Query: 3 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 62
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 67
Query: 63 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 121
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 68 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 124
Query: 122 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 178
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 125 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 181
>48339_bna-miR159:pmrd
Length = 183
Score = 250 bits (126), Expect = 3e-67
Identities = 167/177 (94%), Gaps = 4/177 (2%)
Strand = Plus / Plus
Query: 3 gctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatggatc 62
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 65
Query: 63 ccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatctc 121
||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 66 ccataagccctaatccttatatata--aaaaggattt-ggttatatggcttacatatctc 122
Query: 122 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 178
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 123 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctc 179
>46931_ath-miR159a:pmrd
Length = 184
Score = 244 bits (123), Expect = 2e-65
Identities = 167/179 (93%), Gaps = 2/179 (1%)
Strand = Plus / Plus
Query: 1 gagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgga 60
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 4 gagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatgga 63
Query: 61 tcccataagccctaa-ccttaaacatagaaaaaggattttggttatatggcttgcatatc 119
||||||||||||||| |||| | | ||||||||||| |||||||||| |||||||||
Sbjct: 64 tcccataagccctaatccttgtaaagtaaaaaaggattt-ggttatatggattgcatatc 122
Query: 120 tcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctc 181
>46932_ath-miR159b:pmrd
Length = 196
Score = 93.7 bits (47), Expect = 4e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 1 gagctccttaaagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgga 60
||||||||| |||||||| ||| |||||||||||| ||| |||||||||||||||||||
Sbjct: 5 gagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgga 64
Query: 61 tcccataagcc 71
|||||||||||
Sbjct: 65 tcccataagcc 75
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 104 ggcttgcatatctcaggagcttta 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 aagctgctaagctatggatcc 63
|||||||||||||||||||||
Sbjct: 49 aagctgctaagctatggatcc 69
>51604_ptc-miR159c:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 aagctgctaagctatggatcc 63
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
>51603_ptc-miR159b:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>51602_ptc-miR159a:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 aagctgctaagctatggatcc 63
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
>54378_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctc 178
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>54377_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctc 178
|||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctc 171
>48539_gma-miR159a:pmrd
Length = 214
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctc 178
|||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctc 193
>54777_vvi-miR159c:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 107 tggcttgcatatctcaggagct 128
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 ttctttggattgaagggagctc 178
||||||||||||||||||||||
Sbjct: 145 ttctttggattgaagggagctc 166
>54930_zma-miR159a:pmrd
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctc 225
>54674_tae-miR159b:pmrd
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctc 248
>54631_sof-miR159d:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54629_sof-miR159b:pmrd
Length = 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctc 245
>54628_sof-miR159a:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54392_sar-miR159:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctc 173
>51338_pgl-miR159:pmrd
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctc 224
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctc 247
>48820_osa-miR159b:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctc 176
>48819_osa-miR159a:pmrd
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>48796_oru-miR159:pmrd
Length = 274
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctc 178
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
