miRNEST 2.0, an integrative microRNA resource :: BLAST
>54772_vvi-miR156g:pmrd
Length = 103
Score = 61.9 bits (31), Expect = 6e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 40 tttgcatctcactcctttgtactctctatacttctgtca 78
|||||||||||||||||||| ||||||| ||||||||||
Sbjct: 52 tttgcatctcactcctttgtgctctctagacttctgtca 90
>48531_gma-miR156d:pmrd
Length = 151
Score = 58.0 bits (29), Expect = 9e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 42 tgcatctcactcctttgtactctctatacttctgtca 78
||||||| |||||||||| ||||||||||||||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctgtca 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcac 41
>46862_aqc-miR156b:pmrd
Length = 83
Score = 58.0 bits (29), Expect = 9e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 42 tgcatctcactcctttgtactctctatacttctgtca 78
|||||||||||||||||| |||||||| |||||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctgtca 81
>54774_vvi-miR156i:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 43 gcatctcactcctttgtactctctatacttctgtca 78
||||||||||||||||| |||||||| |||||||||
Sbjct: 55 gcatctcactcctttgtgctctctattcttctgtca 90
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 6e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 41 ttgcatctcactcctttgtactctctatacttctgtca 78
||||||||||||||||||| ||||||| |||||||||
Sbjct: 48 ttgcatctcactcctttgtgctctctagtcttctgtca 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaccaacgatgaa 30
|||||||||||||||||||| ||||||||
Sbjct: 3 tgacagaagatagagagcactgacgatgaa 32
>51598_ptc-miR156h:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 41 ttgcatctcactcctttgtactctctatacttctgtca 78
||||||||||||||||||| ||||||| |||||||||
Sbjct: 57 ttgcatctcactcctttgtgctctctagtcttctgtca 94
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaccaacgatgaa 30
|||||||||||||||||||| ||||||||
Sbjct: 12 tgacagaagatagagagcactgacgatgaa 41
>51597_ptc-miR156g:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 41 ttgcatctcactcctttgtactctctatacttctgtca 78
||||||||||||||||||| ||||||| |||||||||
Sbjct: 57 ttgcatctcactcctttgtgctctctagtcttctgtca 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 42 tgcatctcactcctttgtactctctatacttctgtca 78
|||||| ||||||||||| |||||||| |||||||||
Sbjct: 47 tgcatcccactcctttgtgctctctatgcttctgtca 83
>51600_ptc-miR156j:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 42 tgcatctcactcctttgtactctctatacttctgtca 78
|||||| ||||||||||| |||||||| |||||||||
Sbjct: 55 tgcatcccactcctttgtgctctctatgcttctgtca 91
>48695_mtr-miR156e:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 42 tgcatctcactcctttgtactctctatacttctgtca 78
||||| |||||||||||| |||||||| |||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctgtca 167
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>48631_gra-miR157b:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 42 tgcatctcactcctttgtactctctatacttctgtca 78
|||||| ||||||||||| |||||||| |||||||||
Sbjct: 50 tgcatcccactcctttgtgctctctatgcttctgtca 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcac 25
>48537_gma-miR157c:pmrd
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 43 gcatctcactcctttgtactctctatacttctgtca 78
||||||||||||||||| ||||||| |||||||||
Sbjct: 36 gcatctcactcctttgtgctctctagtcttctgtca 1
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 83 tgacagaagatagagagcac 64
>48532_gma-miR156e:pmrd
Length = 124
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 43 gcatctcactcctttgtactctctatacttctgtca 78
||||||||||||||||| ||||||| |||||||||
Sbjct: 69 gcatctcactcctttgtgctctctagtcttctgtca 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcac 41
>51599_ptc-miR156i:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 45 atctcactcctttgtactctctatacttctg 75
||||||||||||||| |||||||| ||||||
Sbjct: 58 atctcactcctttgtgctctctatgcttctg 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>46926_ath-miR157c:pmrd
Length = 217
Score = 44.1 bits (22), Expect = 1e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 42 tgcatctc-actcctttgtactctctatacttctgtca 78
|||||||| |||| ||||| ||||||||||||||||||
Sbjct: 151 tgcatctctactcttttgtgctctctatacttctgtca 188
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaccaacgatga 29
|||||||||||||||||||| || |||||
Sbjct: 25 tgacagaagatagagagcactaaggatga 53
>54661_stu-miR157a:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaccaacgatga 29
|||||||||||||||||||| || |||||
Sbjct: 2 tgacagaagatagagagcactaatgatga 30
>54532_sly-miR156a:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaccaacgatga 29
|||||||||||||||||||| || |||||
Sbjct: 2 tgacagaagatagagagcactaatgatga 30
>48630_gra-miR157a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 42 tgcatctcactcctttgtactctctatacttctgtca 78
|||||| ||||||||||| |||| ||| |||||||||
Sbjct: 60 tgcatcccactcctttgtgctctttatgcttctgtca 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcac 25
>48393_bra-miR157a:pmrd
Length = 149
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaccaacgatga 29
|||||||||||||||||||| || |||||
Sbjct: 15 tgacagaagatagagagcactaaggatga 43
>48384_bol-miR157a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaccaacgatga 29
|||||||||||||||||||| || |||||
Sbjct: 7 tgacagaagatagagagcactaaggatga 35
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 50 actcctttgtactctctatacttctgtca 78
|||| ||||| ||||||||||||||||||
Sbjct: 73 actcttttgtgctctctatacttctgtca 101
>48338_bna-miR156c:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaccaacgatga 29
|||||||||||||||||||| || |||||
Sbjct: 19 tgacagaagatagagagcactaaggatga 47
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 50 actcctttgtactctctatacttctgtca 78
|||| ||||| ||||||||||||||||||
Sbjct: 109 actcttttgtgctctctatacttctgtca 137
>48337_bna-miR156b:pmrd
Length = 208
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaccaacgatga 29
|||||||||||||||||||| || |||||
Sbjct: 26 tgacagaagatagagagcactaaggatga 54
>54771_vvi-miR156f:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>54534_sly-miR156c:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>54533_sly-miR156b:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>51552_pta-miR156b:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>51551_pta-miR156a:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>48790_nta-miR157:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>48697_mtr-miR156h:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>48696_mtr-miR156f:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>48675_lja-miR157a:pmrd
Length = 58
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>48642_han-miR157a:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>48530_gma-miR156c:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 147 tgacagaagatagagagcac 166
>46927_ath-miR157d:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>46925_ath-miR157b:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 20 tgacagaagatagagagcac 39
>46924_ath-miR157a:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcac 24
>46861_aqc-miR156a:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>54537_sly-miR157c:pmrd
Length = 123
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 104 tgacagaagatagagagca 122
>54536_sly-miR157b:pmrd
Length = 430
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>54535_sly-miR157a:pmrd
Length = 53
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>51323_pco-miR157:pmrd
Length = 184
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48677_lja-miR157c:pmrd
Length = 460
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48670_ini-miR157b:pmrd
Length = 183
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48669_ini-miR157a:pmrd
Length = 126
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48668_iba-miR157:pmrd
Length = 283
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
