miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 252 bits (127), Expect = 7e-68
Identities = 153/164 (93%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacagccctatcaccatctgttattttgacgggcctgcggcttgcatatctcaggagc 120
|||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||
Sbjct: 73 cccacagccctatcaccatcagtcattttgatgggcctgcggcttgcatatctcaggagc 132
Query: 121 tttattacctaatgttggatcnnnnnnnggattgaagggagctc 164
|||||||||||||||| |||| ||||||||||||||||
Sbjct: 133 tttattacctaatgttagatctttttttggattgaagggagctc 176
>54777_vvi-miR159c:pmrd
Length = 190
Score = 83.8 bits (42), Expect = 4e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
|||||||||||||||||||||| | || | |||||||||| |||||||||| |||| ||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacagccctatc 74
||||||||||||||
Sbjct: 71 cccacagccctatc 84
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 75.8 bits (38), Expect = 9e-15
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 98 tgcggcttgcatatctcaggagctttattacctaatgttggatcnnnnnnnggattgaag 157
||||||||||||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 101 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 160
Query: 158 ggagctc 164
|||||||
Sbjct: 161 ggagctc 167
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
|||||||||||||||||||||| | || |||||||||||| ||||||| ||||||| ||
Sbjct: 8 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 67
Query: 61 cc 62
||
Sbjct: 68 cc 69
>51604_ptc-miR159c:pmrd
Length = 183
Score = 75.8 bits (38), Expect = 9e-15
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 98 tgcggcttgcatatctcaggagctttattacctaatgttggatcnnnnnnnggattgaag 157
||||||||||||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 106 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 165
Query: 158 ggagctc 164
|||||||
Sbjct: 166 ggagctc 172
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
|||||||||||||||||||||| | || |||||||||||| ||||||| ||||||| ||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>51602_ptc-miR159a:pmrd
Length = 183
Score = 75.8 bits (38), Expect = 9e-15
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 98 tgcggcttgcatatctcaggagctttattacctaatgttggatcnnnnnnnggattgaag 157
||||||||||||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 106 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 165
Query: 158 ggagctc 164
|||||||
Sbjct: 166 ggagctc 172
>54378_pvu-miR159:pmrd
Length = 174
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
||||||||||||||||||| || | || | |||||| ||| |||||||| ||||||| ||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
>54377_pvu-miR159:pmrd
Length = 174
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
||||||||||||||||||| || | || | |||||| ||| |||||||| ||||||| ||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
>48539_gma-miR159a:pmrd
Length = 214
Score = 54.0 bits (27), Expect = 3e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 60
||||||||||||||||||| || | || | |||||| || |||||||| ||||||| ||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacag 67
|||||||
Sbjct: 83 cccacag 89
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 ttgcatatctcaggagcttta 124
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 101 ggcttgcatatctcaggagcttta 124
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 101 ggcttgcatatctcaggagcttta 124
||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132
