miRNEST 2.0, an integrative microRNA resource :: BLAST
>47013_ath-miR398b:pmrd
Length = 116
Score = 81.8 bits (41), Expect = 8e-17
Identities = 84/97 (86%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 cagggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccacatcattataa 60
|||||| |||||||||||||| | | ||||||||||||||||||||| || ||||| | |
Sbjct: 11 cagggttgatatgagaacacacgagtaatcaacggctgtaatgacgctacgtcattgtta 70
Query: 61 cacatctgtcttttcatgtgttctcaggtcacccctg 97
|| ||| |||||||||||||||||||||||||||
Sbjct: 71 cagctct-cgttttcatgtgttctcaggtcacccctg 106
>47014_ath-miR398c:pmrd
Length = 115
Score = 75.8 bits (38), Expect = 5e-15
Identities = 83/97 (85%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 1 cagggtcgatatgagaacacatgtgcaatcaacggctgtaatgacgccacatcattataa 60
|||||| |||||||||||||| | ||||||||||||| ||| ||||| || ||||| |
Sbjct: 11 cagggttgatatgagaacacacgagcaatcaacggctataacgacgctacgtcattgt-- 68
Query: 61 cacatctgtcttttcatgtgttctcaggtcacccctg 97
||| || || ||||||||||||||||||||||||||
Sbjct: 69 tacagctctcgtttcatgtgttctcaggtcacccctg 105
>51745_ptc-miR398b:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 73 ttcatgtgttctcaggtcacccctg 97
|||||||||||||||||| ||||||
Sbjct: 52 ttcatgtgttctcaggtcgcccctg 76
>54876_vvi-miR398c:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 tcatgtgttctcaggtcacccctg 97
||||||||||||||||| ||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctg 78
>54875_vvi-miR398b:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 tcatgtgttctcaggtcacccctg 97
||||||||||||||||| ||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctg 78
>54874_vvi-miR398a:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>52988_ptc-miRf11166-akr:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 75 tgtgttctcaggtcacccct 94
>51744_ptc-miR398a:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccct 99
>48962_osa-miR398a:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>48749_mtr-miR398a:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 tcatgtgttctcaggtcacccctg 97
||||||||||||||||| ||||||
Sbjct: 54 tcatgtgttctcaggtcgcccctg 77
>48582_gma-miR398b:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 96 tgtgttctcaggtcacccct 115
>48581_gma-miR398a:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcacccct 96
>48511_ghr-miR398:pmrd
Length = 67
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcacccct 66
>48391_bol-miR398a:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 71 tgtgttctcaggtcacccct 90
>48390_bol-miR398a:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 71 tgtgttctcaggtcacccct 90
>47012_ath-miR398a:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 75 tgtgttctcaggtcacccct 94
>46889_aqc-miR398a:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
