miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48678_lja-miR167:pmrd
Length = 108
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgagcttaccttcttgtaataatggtaagaacagatcatatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctgagcttaccttcttgtaataatggtaagaacagatcatatgg 82
Query: 61 cagctt 66
||||||
Sbjct: 83 cagctt 88
>48558_gma-miR167n:pmrd
Length = 64
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgagcttaccttct 31
||||||||||||||||||||| |||||||||
Sbjct: 3 aagctgccagcatgatctgagtttaccttct 33
>54990_zma-miR167m:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgag 21
|||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctgag 23
>54982_zma-miR167e:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgag 21
|||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctgag 43
>54433_sbi-miR167g:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgagctta 25
|||||||||||||||||||| ||||
Sbjct: 23 aagctgccagcatgatctgatctta 47
>54432_sbi-miR167f:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgag 21
|||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctgag 43
>52000_ptc-miRf10178-akr:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgagcttacctt 29
||||||||| |||||||||||||| ||||
Sbjct: 14 aagctgccaacatgatctgagctttcctt 42
>51649_ptc-miR167h:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgagcttacctt 29
||||||||| |||||||||||||| ||||
Sbjct: 13 aagctgccaacatgatctgagctttcctt 41
>51646_ptc-miR167e:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgagcttacctt 29
|||||||||||||||||||| ||| ||||
Sbjct: 13 aagctgccagcatgatctgaactttcctt 41
>48420_cle-miR167:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgagcttacctt 29
|||||||||||||||||||| ||| ||||
Sbjct: 13 aagctgccagcatgatctgaactttcctt 41
>54989_zma-miR167l:pmrd
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctga 22
>54983_zma-miR167f:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctga 42
>54798_vvi-miR167b:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctgagctt 24
|||||||||||||||||| |||||
Sbjct: 13 aagctgccagcatgatctaagctt 36
>54654_ssp-miR167:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctga 22
>54635_sof-miR167b:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctga 42
>54634_sof-miR167a:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctga 42
>54434_sbi-miR167h:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctga 22
>54431_sbi-miR167e:pmrd
Length = 179
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctga 42
>54430_sbi-miR167d:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctga 42
>50425_osa-miRf11210-akr:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 14 aagctgccagcatgatctga 33
>50424_osa-miRf11209-akr:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 20 aagctgccagcatgatctga 39
>49693_osa-miRf10478-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 78 aagctgccagcatgatctga 59
>49692_osa-miRf10477-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 20 aagctgccagcatgatctga 39
>48870_osa-miR167n:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctga 22
>48869_osa-miR167m:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctga 22
>48868_osa-miR167j:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 28 aagctgccagcatgatctga 47
>48866_osa-miR167h:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctga 32
>48865_osa-miR167g:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctga 32
>48864_osa-miR167f:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctga 32
>48862_osa-miR167d:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctga 20
||||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctga 32
>54988_zma-miR167k:pmrd
Length = 91
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctg 21
>54987_zma-miR167j:pmrd
Length = 91
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctg 21
>54986_zma-miR167i:pmrd
Length = 130
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctg 41
>54985_zma-miR167h:pmrd
Length = 143
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctg 41
>54984_zma-miR167g:pmrd
Length = 243
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctg 41
>54797_vvi-miR167a:pmrd
Length = 351
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctg 31
>54429_sbi-miR167c:pmrd
Length = 133
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 23 aagctgccagcatgatctg 41
>54373_pts-miR167:pmrd
Length = 409
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctg 21
>51350_ppl-miR167b:pmrd
Length = 431
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctg 31
>48867_osa-miR167i:pmrd
Length = 201
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctg 31
>48863_osa-miR167e:pmrd
Length = 273
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctg 31
>48673_ini-miR167:pmrd
Length = 271
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctg 21
>48559_gma-miR167o:pmrd
Length = 109
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 91 aagctgccagcatgatctg 109
>48556_gma-miR167c:pmrd
Length = 375
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 13 aagctgccagcatgatctg 31
>46956_ath-miR167m:pmrd
Length = 342
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctg 21
>46955_ath-miR167d:pmrd
Length = 377
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctg 19
|||||||||||||||||||
Sbjct: 20 aagctgccagcatgatctg 38
