miRNEST 2.0, an integrative microRNA resource :: BLAST
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 63.9 bits (32), Expect = 4e-11
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatggat 60
|||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||||
Sbjct: 8 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga- 66
Query: 61 tccacagtccta 72
||||||||||||
Sbjct: 67 tccacagtccta 78
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 90 ggataggcttgcggcttgcatatgttaggagctttatt 127
||||||| ||||||||||||||| | ||||||||||||
Sbjct: 92 ggataggtttgcggcttgcatatctcaggagctttatt 129
>51604_ptc-miR159c:pmrd
Length = 183
Score = 63.9 bits (32), Expect = 4e-11
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatggat 60
|||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga- 71
Query: 61 tccacagtccta 72
||||||||||||
Sbjct: 72 tccacagtccta 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 90 ggataggcttgcggcttgcatatgttaggagctttatt 127
||||||| ||||||||||||||| | ||||||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttatt 134
>51603_ptc-miR159b:pmrd
Length = 187
Score = 63.9 bits (32), Expect = 4e-11
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 99 tgcggcttgcatatgttaggagctttattacctctttgttttatctttctttggattgaa 158
|||||||||||||| | |||||||||||||||| |||| |||||| |||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacct-aatgttagatctttttttggattgaa 168
Query: 159 gggagctc 166
||||||||
Sbjct: 169 gggagctc 176
>51602_ptc-miR159a:pmrd
Length = 183
Score = 63.9 bits (32), Expect = 4e-11
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatggat 60
|||||||||||||||||| ||||| | |||| ||||| || |||||||| | |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga- 71
Query: 61 tccacagtccta 72
||||||||||||
Sbjct: 72 tccacagtccta 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 90 ggataggcttgcggcttgcatatgttaggagctttatt 127
||||||| ||||||||||||||| | ||||||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttatt 134
>54540_sly-miR159:pmrd
Length = 177
Score = 58.0 bits (29), Expect = 2e-09
Identities = 57/64 (89%), Gaps = 3/64 (4%)
Strand = Plus / Plus
Query: 105 ttgcatatgttaggagctttatt--acctctttgttttatctttctttggattgaaggga 162
|||||||||| |||||||||||| ||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 163 gctc 166
||||
Sbjct: 172 gctc 175
>48699_mtr-miR159a:pmrd
Length = 168
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 136 gttttatctttctttggattgaagggagctc 166
|||| ||||||||||||||||||||||||||
Sbjct: 136 gtttaatctttctttggattgaagggagctc 166
>54777_vvi-miR159c:pmrd
Length = 190
Score = 48.1 bits (24), Expect = 2e-06
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatggat 60
|||||||||||||||||| ||||| | || | ||||| || ||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 tccacagtccta 72
|||||| ||||
Sbjct: 71 cccacagcccta 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 90 ggataggcttgcggcttgcatatgttaggagct 122
||||||||||| ||||||||||| | |||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagct 135
>48539_gma-miR159a:pmrd
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatggat 60
|||||||||||||||||| |||||| || | |||| ||| ||||||| | ||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 tccacagt 68
|||||||
Sbjct: 83 cccacagt 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 ttctttggattgaagggagctc 166
||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctc 193
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 ttctttggattgaagggagctc 166
||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctc 171
Score = 40.1 bits (20), Expect = 5e-04
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatggat 60
|||||||||||||||||| |||||| || | |||| || ||||||| | ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 tccacagt 68
|||||||
Sbjct: 64 cccacagt 71
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 ttctttggattgaagggagctc 166
||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctc 171
Score = 40.1 bits (20), Expect = 5e-04
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaaagaggattttgcagggtaaatcaagctgctgatctatggat 60
|||||||||||||||||| |||||| || | |||| || ||||||| | ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 tccacagt 68
|||||||
Sbjct: 64 cccacagt 71
>48395_bra-miR159a:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 ttctttggattgaagggagctc 166
||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctc 181
>48339_bna-miR159:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 ttctttggattgaagggagctc 166
||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctc 179
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 ttctttggattgaagggagctc 166
||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctc 186
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 145 ttctttggattgaagggagctc 166
||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctc 181
>54930_zma-miR159a:pmrd
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctc 225
>54674_tae-miR159b:pmrd
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctc 248
>54631_sof-miR159d:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54629_sof-miR159b:pmrd
Length = 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctc 245
>54628_sof-miR159a:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54392_sar-miR159:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctc 173
>51338_pgl-miR159:pmrd
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctc 224
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctc 247
>48820_osa-miR159b:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctc 176
>48819_osa-miR159a:pmrd
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 tctttggattgaagggagctc 166
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
